Miyakogusa Predicted Gene
- Lj6g3v1174050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1174050.1 Non Chatacterized Hit- tr|I1MHI6|I1MHI6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.05,0,B3 DNA
binding domain,B3 DNA binding domain; B3,B3 DNA binding domain;
Auxin_resp,Auxin response fac,CUFF.59188.1
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV409033 homologue to UniRef100_Q6L8U3 Cluster: Auxin r... 565 e-160
gnl|LJGI|BP056523 similar to UniRef100_A7PDS6 Cluster: Chromosom... 147 1e-34
gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromos... 98 1e-19
gnl|LJGI|TC61200 similar to UniRef100_A2Q532 Cluster: Transcript... 80 3e-14
gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromos... 66 4e-10
gnl|LJGI|TC60440 similar to UniRef100_A2Q532 Cluster: Transcript... 58 1e-07
>gnl|LJGI|AV409033 homologue to UniRef100_Q6L8U3 Cluster: Auxin response factor 1;
n=1; Cucumis sativus|Rep: Auxin response factor 1 -
Cucumis sativus (Cucumber), partial (13%)
Length = 418
Score = 565 bits (285), Expect = e-160
Identities = 381/413 (92%)
Strand = Plus / Plus
Query: 22 tacttgcctaattctggtgaaggagaaaggaagagcatcaattcagagttatggcatgct 81
|||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||
Sbjct: 6 tacttgccaaattctggtgaaggggaaaggaagaccatcaattcagaattatggcatgct 65
Query: 82 tgtgctggaccattggtttctttacctccggttggaagtcttgtggtttacttccctcaa 141
||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 66 tgtgctggacctttggtttctttgcctcctgttggaagtcttgtggtttacttcccgcaa 125
Query: 142 ggacatagtgagcaagttgcagcttccatgcaaaaggaggctgattttatacccagttac 201
||||| ||||||||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 126 ggacacagtgagcaagttgcagcttccatgcaaaaggagactgacttcatacccagttac 185
Query: 202 cctaaccttccctccaagttgatttgcatgcttcacaatgttgccttgcatgctgatcct 261
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 186 cctaaccttccctccaagttgatttgcatgcttcacaatgttgcgctgcatgctgatcct 245
Query: 262 gaaactgacgaggtctatgcacagatgacccttcaaccagtaaataaatatgacaaggaa 321
||||||||||| ||||||||||| ||||||||||| || ||||| |||||||| |||||
Sbjct: 246 gaaactgacgaagtctatgcacaaatgacccttcagcctgtaaacaaatatgataaggat 305
Query: 322 gcaatgttggcatcagacatggggctcaaacaaaacaaccaacctactgaattcttttgc 381
||||| |||||||||||||||| |||||||||||| |||||||| || |||||||||
Sbjct: 306 gcaatactggcatcagacatgggtctcaaacaaaaccgacaacctacagagttcttttgc 365
Query: 382 aaaactcttacagctagtgacactagcactcatggtggattctctgtgcctcg 434
|||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 366 aaaactcttacagctagtgatacaagcactcatggtggattttctgtgcctcg 418
>gnl|LJGI|BP056523 similar to UniRef100_A7PDS6 Cluster: Chromosome chr11 scaffold_13
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (2%)
Length = 546
Score = 147 bits (74), Expect = 1e-34
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 atgaaggctcctcccaatggctacttgcctaattctggtgaaggagaaaggaagagcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atgaaggctcctcccaatggctacttgcctaattctggtgaaggagaaaggaagagcatc 532
Query: 61 aattcagagttatg 74
||||||||||||||
Sbjct: 533 aattcagagttatg 546
>gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 545
Score = 97.6 bits (49), Expect = 1e-19
Identities = 106/125 (84%)
Strand = Plus / Plus
Query: 721 agtgacagcatgcatattggcattcttgctgctgcagctcatgctgcttcaaataacagc 780
||||| |||||||| |||||| |||||||||||||||||||||| ||||| | || ||
Sbjct: 410 agtgatagcatgcacattggccttcttgctgctgcagctcatgcagcttccacaaatagt 469
Query: 781 ccttttactatattttataatccaaggaccagcccctctgaatttgtaattccattggcc 840
| ||||| ||||| |||||||| ||| | ||||| ||||||||||||||||| ||||||
Sbjct: 470 cgctttaccatattctataatcctagggcaagcccatctgaatttgtaattcctttggcc 529
Query: 841 aagta 845
||||
Sbjct: 530 cagta 534
Score = 52.0 bits (26), Expect = 6e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 397 agtgacactagcactcatggtggattctctgtgcctcgtagagcagctga 446
||||| || ||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 86 agtgataccagcactcatggaggattttctgttcctcgaagagcagctga 135
>gnl|LJGI|TC61200 similar to UniRef100_A2Q532 Cluster: Transcriptional factor B3; Auxin
response factor; n=1; Medicago truncatula|Rep:
Transcriptional factor B3; Auxin response factor -
Medicago truncatula (Barrel medic), partial (37%)
Length = 1325
Score = 79.8 bits (40), Expect = 3e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 379 tgcaaaactcttacagctagtgacactagcactcatggtggattctctgtgcctcgtaga 438
||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 1020 tgcaagactctgacagcttcagacactagcactcatggtggattctctgtgcctcgtcga 1079
Query: 439 gcagctga 446
|| |||||
Sbjct: 1080 gctgctga 1087
>gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 435
Score = 65.9 bits (33), Expect = 4e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 394 gctagtgacactagcactcatggtggattctctgtgcctcg 434
||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 306 gctagtgacacaagcactcatgggggattctctgtgcctcg 346
>gnl|LJGI|TC60440 similar to UniRef100_A2Q532 Cluster: Transcriptional factor B3;
Auxin response factor; n=1; Medicago truncatula|Rep:
Transcriptional factor B3; Auxin response factor -
Medicago truncatula (Barrel medic), partial (21%)
Length = 766
Score = 58.0 bits (29), Expect = 1e-07
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 403 actagcactcatggtggattctctgtgcctcgt 435
||||| |||||||||||||||||||||||||||
Sbjct: 732 actagtactcatggtggattctctgtgcctcgt 764