Miyakogusa Predicted Gene
- Lj6g3v1164020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1164020.1 tr|G7JPD2|G7JPD2_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_4g059460
PE,81.76,0,DEAD_ATP_HELICASE,RNA helicase, ATP-dependent, DEAD-box,
conserved site; DEAD-like helicases superfa,CUFF.59177.1
(1848 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72964 similar to UniRef100_A7PDS5 Cluster: Chromosome... 1380 0.0
gnl|LJGI|TC62536 similar to UniRef100_A7PDS5 Cluster: Chromosome... 640 0.0
>gnl|LJGI|TC72964 similar to UniRef100_A7PDS5 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 712
Score = 1380 bits (696), Expect = 0.0
Identities = 696/696 (100%)
Strand = Plus / Plus
Query: 1 atgatggagacgaagaagaagatgaagaagagtacacaagtggtgcaaagtaaagatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 atgatggagacgaagaagaagatgaagaagagtacacaagtggtgcaaagtaaagatttt 76
Query: 61 gagaagaagggtgttgctggcaatggtgctaggaatggaagctgtggagataacagtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gagaagaagggtgttgctggcaatggtgctaggaatggaagctgtggagataacagtgtt 136
Query: 121 tttgcttcttgttcgttctcaagccttggccttcattccagtttgtgtgaccaacttcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tttgcttcttgttcgttctcaagccttggccttcattccagtttgtgtgaccaacttcgt 196
Query: 181 gataggttaggctttgaagctccaactttggtgcaagctcaagcaattcctgtcatcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gataggttaggctttgaagctccaactttggtgcaagctcaagcaattcctgtcatcctc 256
Query: 241 tccgggcgccatgccctggttaatgcggccacgggcacagggaagactattgcctacctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tccgggcgccatgccctggttaatgcggccacgggcacagggaagactattgcctacctg 316
Query: 301 gctcctatcattcattacttgcagagttatgataaccgaatccagcgttctgatggaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gctcctatcattcattacttgcagagttatgataaccgaatccagcgttctgatggaaca 376
Query: 361 tttgcgttggttcttgtaccgacgcgagagctatgtttgcaggtttatgaaattcttgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tttgcgttggttcttgtaccgacgcgagagctatgtttgcaggtttatgaaattcttgtg 436
Query: 421 aagttactgcaccggtttcattggattgttccaggatacattatgggtggtgagaataga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aagttactgcaccggtttcattggattgttccaggatacattatgggtggtgagaataga 496
Query: 481 tccaaggagaaagccaggctgcgcaaaggtatatcaattcttatagcaactcctgggcgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tccaaggagaaagccaggctgcgcaaaggtatatcaattcttatagcaactcctgggcgc 556
Query: 541 cttctagatcacttgaagaagacatcatcattcgtatacacaaatttgcgctggataatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cttctagatcacttgaagaagacatcatcattcgtatacacaaatttgcgctggataatt 616
Query: 601 tttgatgaagctgatcggattttggaattaggatttggaaaagatatagaggaaatacta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tttgatgaagctgatcggattttggaattaggatttggaaaagatatagaggaaatacta 676
Query: 661 gatcttttaggttcaacgagaaccgggtgtgatgac 696
||||||||||||||||||||||||||||||||||||
Sbjct: 677 gatcttttaggttcaacgagaaccgggtgtgatgac 712
>gnl|LJGI|TC62536 similar to UniRef100_A7PDS5 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 845
Score = 640 bits (323), Expect = 0.0
Identities = 343/352 (97%)
Strand = Plus / Plus
Query: 1497 acatggacaaagtaaacacttaaagaaatcagttttcatagactcgcatccctgggtgct 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatggacaaagtaaacacttaaagaaatcagttttcatagactcgcatccctgggtgct 60
Query: 1557 ctgtctacagaaggcacttgaatccttcataacatccaagcccaagctggatgaacttgc 1616
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 61 ctgtctacagaaggcacttgaatccttcataacatccaaacccaagctggatgaacttac 120
Query: 1617 caagagggcattctgctcttgggtccgtgcatacacagcctataagggtgatctgnnnnn 1676
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagagggcattctgctcttgggtccgtgcatacacagcctataagggtgatctgaaaaa 180
Query: 1677 nntatttctgatcaagaaacttcacttggggcatgtagcaaaaagctttgcattgaaaca 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatatttctgatcaagaaacttcacttggggcatgtagcaaaaagctttgcattgaaaca 240
Query: 1737 acaaccctccttagttggaaagtcattccaaaagcaaattaagaagagaaagagatatga 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaaccctccttagttggaaagtcattccaaaagcaaattaagaagagaaagagatatga 300
Query: 1797 gaagaataatgggctgtcaaataagagaaaagttgcgagggtgacataatgc 1848
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagaataatgggctgtcaaataagagaaaagttgcgagggtgacataatgc 352