Miyakogusa Predicted Gene
- Lj6g3v1162900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1162900.1 Non Chatacterized Hit- tr|D7LI67|D7LI67_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,40.28,2e-19,Auxin_inducible,Auxin responsive SAUR protein;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.59168.1
(504 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69164 similar to UniRef100_Q8H6T6 Cluster: Auxin-regu... 795 0.0
gnl|LJGI|BP037843 homologue to UniRef100_Q8H6T6 Cluster: Auxin-r... 74 9e-13
>gnl|LJGI|TC69164 similar to UniRef100_Q8H6T6 Cluster: Auxin-regulated protein; n=1;
Phaseolus vulgaris|Rep: Auxin-regulated protein -
Phaseolus vulgaris (Kidney bean) (French bean), partial
(69%)
Length = 768
Score = 795 bits (401), Expect = 0.0
Identities = 401/401 (100%)
Strand = Plus / Plus
Query: 1 atggatcaaggtggaagctccaaagtaacaggaatcaggcaaattgtgagattgaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atggatcaaggtggaagctccaaagtaacaggaatcaggcaaattgtgagattgaaggaa 410
Query: 61 atacttcaaaagtggcaaactgtgaccttaggctcaaaaccttcccttcctaacaaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atacttcaaaagtggcaaactgtgaccttaggctcaaaaccttcccttcctaacaaatct 470
Query: 121 gatgcaactgatcatcatgggagtagatcaccaataattaacagaaggataaaagacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gatgcaactgatcatcatgggagtagatcaccaataattaacagaaggataaaagacatt 530
Query: 181 gtgagttgtgactctgatgaggatagctgccaaagtccagagccgccgtgcgatgttccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gtgagttgtgactctgatgaggatagctgccaaagtccagagccgccgtgcgatgttccg 590
Query: 241 aaaggctatttggcagtgtatgttggaccggagcttcggaggttcatcattcccaccagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aaaggctatttggcagtgtatgttggaccggagcttcggaggttcatcattcccaccagc 650
Query: 301 tatcttacacactctctcttcaaagtgttactggaaaaagctgctgatgaattcgggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tatcttacacactctctcttcaaagtgttactggaaaaagctgctgatgaattcgggttt 710
Query: 361 gaccagagtggtgggctcactatcccttgtgagattgagac 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaccagagtggtgggctcactatcccttgtgagattgagac 751
>gnl|LJGI|BP037843 homologue to UniRef100_Q8H6T6 Cluster: Auxin-regulated protein;
n=1; Phaseolus vulgaris|Rep: Auxin-regulated protein -
Phaseolus vulgaris (Kidney bean) (French bean), partial
(21%)
Length = 428
Score = 73.8 bits (37), Expect = 9e-13
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 340 gctgctgatgaattcgggtttgaccagagtggtgggctcactatcccttgtgagattgag 399
|||||||| ||||| ||||||||||| ||||||| ||||| || || ||||| ||||||
Sbjct: 424 gctgctgaggaatttgggtttgaccacagtggtgcactcaccattccatgtgaaattgag 365
Query: 400 accttcaaattcctcctcaaatgcatggagaac 432
|| || || | ||||||||| ||||||||||||
Sbjct: 364 acttttaagtacctcctcaactgcatggagaac 332