Miyakogusa Predicted Gene
- Lj6g3v1161820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1161820.1 Non Chatacterized Hit- tr|C5Y1H4|C5Y1H4_SORBI
Putative uncharacterized protein Sb04g032730
OS=Sorghu,40.35,0.000000000006,DOG1,DOG1 domain; seg,NULL,CUFF.59157.1
(862 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74588 weakly similar to UniRef100_Q3HTK6 Cluster: Phe... 997 0.0
>gnl|LJGI|TC74588 weakly similar to UniRef100_Q3HTK6 Cluster: Pherophorin-C1 protein
precursor; n=1; Chlamydomonas reinhardtii|Rep:
Pherophorin-C1 protein precursor - Chlamydomonas
reinhardtii, partial (7%)
Length = 1125
Score = 997 bits (503), Expect = 0.0
Identities = 567/591 (95%), Gaps = 5/591 (0%)
Strand = Plus / Plus
Query: 274 tggctcggcgacctccacccctccatcttcaccaacctcgcccgctccttcctccaccag 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tggctcggcgacctccacccctccatcttcaccaacctcgcccgctccttcctccaccag 388
Query: 334 caacaagatcaagaagacgacgacgacgacgatcaagatcaannnnnnnnnnnnnnnnnn 393
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caacaagatcaagaagacgacgacgacgacgatcaagatcaacaccaccaccaccaccac 448
Query: 394 nnngacgatgacaaccactccctcgccgaccaaatcgaccgcgtttcatcatcctcctcc 453
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ---gacgatgacaaccactccctcgccgaccaaatcgaccgcgtttcatcatcctcctcc 505
Query: 454 tccctcaacctccaccgcccctggcaggttgccctcgcatggcgcaaccctcccgagtct 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tccctcaacctccaccgcccctggcaggttgccctcgcatggcgcaaccctcccgagtct 565
Query: 514 ctcctcctccgcatggacgagatcgagtgcggcctgcgcgtcattgtccccacactctcc 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctcctcctccgcatggacgagatcgagtgcggcctgcgcgtcattgtccccacactctcc 625
Query: 574 gaccgcctcgcgcgcgccgaggctgggtttgttcaccgcgtcgtcggcgactggttccag 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gaccgcctcgcgcgcgccgaggctgggtttgttcaccgcgtcgtcggcgactggttccag 685
Query: 634 tgcagggagagcaagggcgctgctaaggtggctgtgggtgaagacgtgagggctcacatg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgcagggagagcaagggcgctgctaaggtggctgtgggtgaagacgtgagggctcacatg 745
Query: 694 gatgaggtggtgagcgtgtttctctgcgccaaccgcgtccggcggagcgttctggtggat 753
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 746 gatgaggtggtgagcgtgtttctctgcgcccaccgcgtccggcggagcgttctggtggat 805
Query: 754 atcatcagcgccgcgacggtgtaccaggc-ggcgttgtttcttgaagggctggcccagtt 812
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 806 atcatcagcgccgcgacggtgtaccaggcgggcgttgtttcttgaagggctggcccagtt 865
Query: 813 ccttattgggttcaaggatcatgacttgctcacttc-ggcccaacactaat 862
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 866 ccttattgggttcaaggatcatgacttgctcacttcgggcccaacactaat 916
Score = 182 bits (92), Expect = 2e-45
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 atgctgaaagcggtgttcagccgtcagaagcagtcgcagtcacaagggttcaaggagtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atgctgaaagcggtgttcagccgtcagaagcagtcgcagtcacaagggttcaaggagtac 115
Query: 61 tactcggagtggttcaccgccctgaagaacaa 92
||||||||||||||||||||||||||||||||
Sbjct: 116 tactcggagtggttcaccgccctgaagaacaa 147
Score = 113 bits (57), Expect = 2e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 154 gtcgaaatgctccaccaacacttccaatcctactaccacgccctcgacgccgccatc 210
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gtcgaaatgctccaccaacacttccaatcctactaccacgccctcgacgccgccatc 265