Miyakogusa Predicted Gene
- Lj6g3v1149670.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1149670.2 tr|G7IIR5|G7IIR5_MEDTR Fiber protein-like protein
OS=Medicago truncatula GN=MTR_2g044550 PE=4
SV=1,48.45,0.00000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.59171.2
(1377 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71128 homologue to UniRef100_A7PDP9 Cluster: Chromoso... 821 0.0
gnl|LJGI|AV417811 similar to UniRef100_A4Q7P3 Cluster: AT-rich i... 622 e-177
gnl|LJGI|FS352962 homologue to UniRef100_A7PDP9 Cluster: Chromos... 402 e-111
gnl|LJGI|TC72685 homologue to UniRef100_A7PDP9 Cluster: Chromoso... 359 3e-98
gnl|LJGI|TC57586 weakly similar to UniRef100_A7PDP9 Cluster: Chr... 248 8e-65
>gnl|LJGI|TC71128 homologue to UniRef100_A7PDP9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 980
Score = 821 bits (414), Expect = 0.0
Identities = 424/426 (99%), Gaps = 1/426 (0%)
Strand = Plus / Plus
Query: 952 gttactcataggaaatctgtgtcgaactcgtttcaagctagccagattatttctttgaat 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttactcataggaaatctgtgtcgaactcgtttcaagctagccagattatttctttgaat 60
Query: 1012 cccctgcctatgaaaaagcatggttgtgacagagctccaataagagcttgctcagaggag 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccctgcctatgaaaaagcatggttgtgacagagctccaataagagcttgctcagaggag 120
Query: 1072 gaattcctgagggatgtgatgcagtttctgatccatcgagggcatactcgtctcatcccg 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaattcctgagggatgtgatgcagtttctgatccatcgagggcatactcgtctcatcccg 180
Query: 1132 caaggtgggcttgctgagttccctgaagccattctgaatgcaaaacgccttgaccttttc 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaggtgggcttgctgagttccctgaagccattctgaatgcaaaacgccttgaccttttc 240
Query: 1192 aacttatatagagagggtggtgtcaaggggaggttttcacgttgggaatggtatcaattg 1251
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacttatatagaga-ggtggtgtcaaggggaggttttcacgttgggaatggtatcaattg 299
Query: 1252 gaaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatgactggtgt 1311
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 300 gaaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatggctggtgt 359
Query: 1312 tggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctcacga 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctcacga 419
Query: 1372 tgacgt 1377
||||||
Sbjct: 420 tgacgt 425
>gnl|LJGI|AV417811 similar to UniRef100_A4Q7P3 Cluster: AT-rich interaction region;
Zinc finger, FYVE/PHD-type; n=1; Medicago
truncatula|Rep: AT-rich interaction region; Zinc finger,
FYVE/PHD-type - Medicago truncatula (Barrel medic),
partial (4%)
Length = 317
Score = 622 bits (314), Expect = e-177
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 544 gtcatgttgggagttgctagtattcaaggattggcggttgcttcttttaataaggatgat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtcatgttgggagttgctagtattcaaggattggcggttgcttcttttaataaggatgat 63
Query: 604 gctgaacgtcttcttttctttagttcaaagcgggagaaagataagtgtcctaaagaacct 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gctgaacgtcttcttttctttagttcaaagcgggagaaagataagtgtcctaaagaacct 123
Query: 664 gttttctctgggaatcctagttggctgaggcctccagcacctagtcgaaaaagatctgaa 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gttttctctgggaatcctagttggctgaggcctccagcacctagtcgaaaaagatctgaa 183
Query: 724 ctatgctctagaacaaagtctattaatactagtagcctgaaagttgaagatattggcagt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ctatgctctagaacaaagtctattaatactagtagcctgaaagttgaagatattggcagt 243
Query: 784 gatagacagaaatcaaattatgctgcaatgaggccagtccctcactctcaacgccagaag 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gatagacagaaatcaaattatgctgcaatgaggccagtccctcactctcaacgccagaag 303
Query: 844 attctccccttttc 857
||||||||||||||
Sbjct: 304 attctccccttttc 317
>gnl|LJGI|FS352962 homologue to UniRef100_A7PDP9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 728
Score = 402 bits (203), Expect = e-111
Identities = 210/211 (99%), Gaps = 1/211 (0%)
Strand = Plus / Minus
Query: 1167 gaatgcaaaacgccttgaccttttcaacttatatagagagggtggtgtcaaggggaggtt 1226
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 728 gaatgcaaaacgccttgaccttttcaacttatatagagagg-tggtgtcaaggggaggtt 670
Query: 1227 ttcacgttgggaatggtatcaattggaaaggacaagttttctcaaagatgcgcaatcaca 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ttcacgttgggaatggtatcaattggaaaggacaagttttctcaaagatgcgcaatcaca 610
Query: 1287 cactgacaaacaaaatgactggtgttggcaatacgctcaagagacactacgaaacttatc 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cactgacaaacaaaatgactggtgttggcaatacgctcaagagacactacgaaacttatc 550
Query: 1347 ttttagaatacgagttagctcacgatgacgt 1377
|||||||||||||||||||||||||||||||
Sbjct: 549 ttttagaatacgagttagctcacgatgacgt 519
>gnl|LJGI|TC72685 homologue to UniRef100_A7PDP9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 772
Score = 359 bits (181), Expect = 3e-98
Identities = 188/189 (99%), Gaps = 1/189 (0%)
Strand = Plus / Plus
Query: 1189 ttcaacttatatagagagggtggtgtcaaggggaggttttcacgttgggaatggtatcaa 1248
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcaacttatatagagagg-tggtgtcaaggggaggttttcacgttgggaatggtatcaa 59
Query: 1249 ttggaaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatgactgg 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ttggaaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatgactgg 119
Query: 1309 tgttggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctca 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgttggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctca 179
Query: 1369 cgatgacgt 1377
|||||||||
Sbjct: 180 cgatgacgt 188
>gnl|LJGI|TC57586 weakly similar to UniRef100_A7PDP9 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 816
Score = 248 bits (125), Expect = 8e-65
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 1 atggaggaagatgaatgtacacctgaaactatttctgccataacgatatatgatgatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 atggaggaagatgaatgtacacctgaaactatttctgccataacgatatatgatgatgct 751
Query: 61 gtgaatatgagatttcttgtttgtggagttccctgcacattggatgcatgtttattgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gtgaatatgagatttcttgtttgtggagttccctgcacattggatgcatgtttattgggg 811
Query: 121 tcatt 125
|||||
Sbjct: 812 tcatt 816