Miyakogusa Predicted Gene
- Lj6g3v1149670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1149670.1 Non Chatacterized Hit- tr|I1L1V4|I1L1V4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48040
PE,86.17,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
ARID,ARID/BRIGHT DNA-binding domain; ARID/BRIGHT DN,CUFF.59171.1
(1518 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71128 homologue to UniRef100_A7PDP9 Cluster: Chromoso... 1116 0.0
gnl|LJGI|FS352962 homologue to UniRef100_A7PDP9 Cluster: Chromos... 658 0.0
gnl|LJGI|TC72685 homologue to UniRef100_A7PDP9 Cluster: Chromoso... 654 0.0
gnl|LJGI|AV417811 similar to UniRef100_A4Q7P3 Cluster: AT-rich i... 622 e-177
gnl|LJGI|TC57586 weakly similar to UniRef100_A7PDP9 Cluster: Chr... 248 9e-65
gnl|LJGI|TC79402 homologue to UniRef100_A4Q7P3 Cluster: AT-rich ... 64 3e-09
>gnl|LJGI|TC71128 homologue to UniRef100_A7PDP9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 980
Score = 1116 bits (563), Expect = 0.0
Identities = 566/567 (99%)
Strand = Plus / Plus
Query: 952 gttactcataggaaatctgtgtcgaactcgtttcaagctagccagattatttctttgaat 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttactcataggaaatctgtgtcgaactcgtttcaagctagccagattatttctttgaat 60
Query: 1012 cccctgcctatgaaaaagcatggttgtgacagagctccaataagagcttgctcagaggag 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccctgcctatgaaaaagcatggttgtgacagagctccaataagagcttgctcagaggag 120
Query: 1072 gaattcctgagggatgtgatgcagtttctgatccatcgagggcatactcgtctcatcccg 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaattcctgagggatgtgatgcagtttctgatccatcgagggcatactcgtctcatcccg 180
Query: 1132 caaggtgggcttgctgagttccctgaagccattctgaatgcaaaacgccttgaccttttc 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaggtgggcttgctgagttccctgaagccattctgaatgcaaaacgccttgaccttttc 240
Query: 1192 aacttatatagagaggtggtgtcaaggggaggttttcacgttgggaatggtatcaattgg 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacttatatagagaggtggtgtcaaggggaggttttcacgttgggaatggtatcaattgg 300
Query: 1252 aaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatgactggtgtt 1311
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 aaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatggctggtgtt 360
Query: 1312 ggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctcacgat 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctcacgat 420
Query: 1372 gacgtagatggagaatgctgcttgttgtgtcacagcagtgcagcaggtgactgggtgaac 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacgtagatggagaatgctgcttgttgtgtcacagcagtgcagcaggtgactgggtgaac 480
Query: 1432 tgcggtatatgtggtgagtgggcacattttggctgtgatcggcggcagggactcggagca 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcggtatatgtggtgagtgggcacattttggctgtgatcggcggcagggactcggagca 540
Query: 1492 tttaaggactatgcaaaaactgatgga 1518
|||||||||||||||||||||||||||
Sbjct: 541 tttaaggactatgcaaaaactgatgga 567
>gnl|LJGI|FS352962 homologue to UniRef100_A7PDP9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 728
Score = 658 bits (332), Expect = 0.0
Identities = 332/332 (100%)
Strand = Plus / Minus
Query: 1167 gaatgcaaaacgccttgaccttttcaacttatatagagaggtggtgtcaaggggaggttt 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gaatgcaaaacgccttgaccttttcaacttatatagagaggtggtgtcaaggggaggttt 669
Query: 1227 tcacgttgggaatggtatcaattggaaaggacaagttttctcaaagatgcgcaatcacac 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tcacgttgggaatggtatcaattggaaaggacaagttttctcaaagatgcgcaatcacac 609
Query: 1287 actgacaaacaaaatgactggtgttggcaatacgctcaagagacactacgaaacttatct 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 actgacaaacaaaatgactggtgttggcaatacgctcaagagacactacgaaacttatct 549
Query: 1347 tttagaatacgagttagctcacgatgacgtagatggagaatgctgcttgttgtgtcacag 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tttagaatacgagttagctcacgatgacgtagatggagaatgctgcttgttgtgtcacag 489
Query: 1407 cagtgcagcaggtgactgggtgaactgcggtatatgtggtgagtgggcacattttggctg 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cagtgcagcaggtgactgggtgaactgcggtatatgtggtgagtgggcacattttggctg 429
Query: 1467 tgatcggcggcagggactcggagcatttaagg 1498
||||||||||||||||||||||||||||||||
Sbjct: 428 tgatcggcggcagggactcggagcatttaagg 397
>gnl|LJGI|TC72685 homologue to UniRef100_A7PDP9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 772
Score = 654 bits (330), Expect = 0.0
Identities = 330/330 (100%)
Strand = Plus / Plus
Query: 1189 ttcaacttatatagagaggtggtgtcaaggggaggttttcacgttgggaatggtatcaat 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcaacttatatagagaggtggtgtcaaggggaggttttcacgttgggaatggtatcaat 60
Query: 1249 tggaaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatgactggt 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatgactggt 120
Query: 1309 gttggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctcac 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctcac 180
Query: 1369 gatgacgtagatggagaatgctgcttgttgtgtcacagcagtgcagcaggtgactgggtg 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgacgtagatggagaatgctgcttgttgtgtcacagcagtgcagcaggtgactgggtg 240
Query: 1429 aactgcggtatatgtggtgagtgggcacattttggctgtgatcggcggcagggactcgga 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aactgcggtatatgtggtgagtgggcacattttggctgtgatcggcggcagggactcgga 300
Query: 1489 gcatttaaggactatgcaaaaactgatgga 1518
||||||||||||||||||||||||||||||
Sbjct: 301 gcatttaaggactatgcaaaaactgatgga 330
>gnl|LJGI|AV417811 similar to UniRef100_A4Q7P3 Cluster: AT-rich interaction region;
Zinc finger, FYVE/PHD-type; n=1; Medicago
truncatula|Rep: AT-rich interaction region; Zinc finger,
FYVE/PHD-type - Medicago truncatula (Barrel medic),
partial (4%)
Length = 317
Score = 622 bits (314), Expect = e-177
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 544 gtcatgttgggagttgctagtattcaaggattggcggttgcttcttttaataaggatgat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtcatgttgggagttgctagtattcaaggattggcggttgcttcttttaataaggatgat 63
Query: 604 gctgaacgtcttcttttctttagttcaaagcgggagaaagataagtgtcctaaagaacct 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gctgaacgtcttcttttctttagttcaaagcgggagaaagataagtgtcctaaagaacct 123
Query: 664 gttttctctgggaatcctagttggctgaggcctccagcacctagtcgaaaaagatctgaa 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gttttctctgggaatcctagttggctgaggcctccagcacctagtcgaaaaagatctgaa 183
Query: 724 ctatgctctagaacaaagtctattaatactagtagcctgaaagttgaagatattggcagt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ctatgctctagaacaaagtctattaatactagtagcctgaaagttgaagatattggcagt 243
Query: 784 gatagacagaaatcaaattatgctgcaatgaggccagtccctcactctcaacgccagaag 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gatagacagaaatcaaattatgctgcaatgaggccagtccctcactctcaacgccagaag 303
Query: 844 attctccccttttc 857
||||||||||||||
Sbjct: 304 attctccccttttc 317
>gnl|LJGI|TC57586 weakly similar to UniRef100_A7PDP9 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 816
Score = 248 bits (125), Expect = 9e-65
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 1 atggaggaagatgaatgtacacctgaaactatttctgccataacgatatatgatgatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 atggaggaagatgaatgtacacctgaaactatttctgccataacgatatatgatgatgct 751
Query: 61 gtgaatatgagatttcttgtttgtggagttccctgcacattggatgcatgtttattgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gtgaatatgagatttcttgtttgtggagttccctgcacattggatgcatgtttattgggg 811
Query: 121 tcatt 125
|||||
Sbjct: 812 tcatt 816
>gnl|LJGI|TC79402 homologue to UniRef100_A4Q7P3 Cluster: AT-rich interaction region;
Zinc finger, FYVE/PHD-type; n=1; Medicago truncatula|Rep:
AT-rich interaction region; Zinc finger, FYVE/PHD-type -
Medicago truncatula (Barrel medic), partial (8%)
Length = 558
Score = 63.9 bits (32), Expect = 3e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 1442 gtggtgagtgggcacattttggctgtgatcggcggcagggactcggagcatttaaggact 1501
||||||||||||| || ||||||||||| | ||||||| || || ||||||||||| |
Sbjct: 1 gtggtgagtgggctcactttggctgtgacagaaggcagggcctaggtgcatttaaggatt 60
Query: 1502 atgcaaaaactgatgg 1517
|||||||||| |||||
Sbjct: 61 atgcaaaaacagatgg 76