Miyakogusa Predicted Gene

Lj6g3v1126350.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1126350.1 tr|D7L787|D7L787_ARALL NPSN13 OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_479220 PE=4 SV=1,72.73,3e-19,
,CUFF.59126.1
         (312 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61298 similar to UniRef100_A7NVY7 Cluster: Chromosome...   206   6e-53

>gnl|LJGI|TC61298 similar to UniRef100_A7NVY7 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (97%)
          Length = 1418

 Score =  206 bits (104), Expect = 6e-53
 Identities = 161/180 (89%)
 Strand = Plus / Plus

                                                                       
Query: 21  gtacatgaataaccttggtaataagaaacttgaactttttgacatgggagctggagcaag 80
           ||||||||||| | |||||||||| ||||||||||| |||||||  ||||| ||||||||
Sbjct: 559 gtacatgaataccattggtaataaaaaacttgaactgtttgacaccggagcaggagcaag 618

                                                                       
Query: 81  tgagcctatagctgaagataatgttcaattggcatcagaactctcaaatcaagaacttat 140
           ||| |||| ||||||||| ||||| ||| ||||||||||| | ||||||||||||||| |
Sbjct: 619 tgaacctacagctgaagaaaatgtccaactggcatcagaaatgtcaaatcaagaacttgt 678

                                                                       
Query: 141 caatgctgggatgaagacaatggatgagactgatcaggctattgaaagatctaaccaggt 200
           ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 679 caatgctgggatgaaaacaatggatgaaactgatcaggctattgagagatctaagcaggt 738



 Score = 69.9 bits (35), Expect = 9e-12
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 262 aggttgtacatcaaacaattgaaatgggcacccaaactgctactaccttga 312
           ||||||||||||||||| ||||| |||||||||||||||||  ||||||||
Sbjct: 735 aggttgtacatcaaacagttgaagtgggcacccaaactgctggtaccttga 785