Miyakogusa Predicted Gene

Lj6g3v1126340.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1126340.1 Non Chatacterized Hit- tr|F6HE29|F6HE29_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,40.16,1e-16,
,CUFF.59125.1
         (459 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70228 similar to UniRef100_Q0IPM3 Cluster: Os12g01828...   880   0.0  

>gnl|LJGI|TC70228 similar to UniRef100_Q0IPM3 Cluster: Os12g0182800 protein; n=1;
           Oryza sativa Japonica Group|Rep: Os12g0182800 protein -
           Oryza sativa subsp. japonica (Rice), partial (58%)
          Length = 667

 Score =  880 bits (444), Expect = 0.0
 Identities = 457/460 (99%), Gaps = 1/460 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattctcaaggattggagaaggaaattgaagaattgaaactgaaggagaagcaggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 93  atggattctcaaggattggagaaggaaattgaagaattgaaactgaaggagaagcaggaa 152

                                                                       
Query: 61  attgatacaagtgcgcattcacatgatcaattgaagatcacttccttttctgaaatcgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 attgatacaagtgcgcattcacatgatcaattgaagatcacttccttttctgaaatcgtc 212

                                                                       
Query: 121 aatgatgttagcctccattttc-agatcattcgcttccccaaacagatatatgtgtggat 179
           |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 213 aatgatgttagcctccatcttccagatcattcgcttccccaaacagatatatgtgtggat 272

                                                                       
Query: 180 tggttacaactctacaaaattgggacacatgtatgcagcagctcctactcgtcctaacaa 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tggttacaactctacaaaattgggacacatgtatgcagcagctcctactcgtcctaacaa 332

                                                                       
Query: 240 cgtggtgtctgtaacttccttacttggagggacatctgataatacaggatctggcattgc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cgtggtgtctgtaacttccttacttggagggacatctgataatacaggatctggcattgc 392

                                                                       
Query: 300 tcgtcgattagtgttgaagactggtctcaatatagtcatggcttgcagtattccaaaaaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcgtcgattagtgttgaagactggtctcaatatagtcatggcttgcagtattccaaaaaa 452

                                                                       
Query: 360 cagccctatgattgagatagaagctgagaagatattgatacagaaactcattagtctggg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cagccctatgattgagatagaagctgagaagatattgatacagaaactcattagtctggg 512

                                                   
Query: 420 ctatacgaagtcaagagttgagggaacatctttataaaat 459
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ctatacgaagtcaagagttgagggaacatctttataaaat 552