Miyakogusa Predicted Gene
- Lj6g3v1104980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1104980.1 Non Chatacterized Hit- tr|I1N1J6|I1N1J6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58319
PE,35.65,0.58,seg,NULL,NODE_93365_length_835_cov_11.724551.path3.1
(379 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75726 similar to UniRef100_P15646 Cluster: rRNA 2'-O-... 664 0.0
gnl|LJGI|BW609805 weakly similar to UniRef100_A8QCR8 Cluster: Zn... 54 6e-07
gnl|LJGI|TC59992 similar to UniRef100_A7PHU4 Cluster: Chromosome... 54 6e-07
>gnl|LJGI|TC75726 similar to UniRef100_P15646 Cluster: rRNA 2'-O-methyltransferase
fibrillarin; n=2; Saccharomyces cerevisiae|Rep: rRNA
2'-O-methyltransferase fibrillarin - Saccharomyces
cerevisiae (Baker's yeast), partial (7%)
Length = 1145
Score = 664 bits (335), Expect = 0.0
Identities = 368/379 (97%)
Strand = Plus / Plus
Query: 1 atgactatcatctacagtcgcgagttcccttgcacgatctcgcaagctgaagctatggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atgactatcatctacagtcgcgagttcccttgcacgatctcgcaagctgaagctatggtt 739
Query: 61 atcgcgcatgaagcgcgtcttgagcgttctcgcacgcgtcagttgagtgcgaatcctccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atcgcgcatgaagcgcgtcttgagcgttctcgcacgcgtcagttgagtgcgaatcctccg 799
Query: 121 tcagcgctcctttctcaagctgcgtcaccggcgacgcaacctgcaccggtgtcgtcgtct 180
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 800 tcagcgctcctttctcaagctgcgccaccggcgacgcaacctgcaccggcgtcgtcgtct 859
Query: 181 tcttcatcaacatcgtcgccgacgacctctgaggctaactatgcttcaggttcctctgaa 240
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tcttcatcaacgtcgtcgccggcgacctctgaggctaactatgcttcaggttcctctgaa 919
Query: 241 aactcctacgatgatcgttcctacgataatcgcggcagttatggcggttctcgtggcggt 300
||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct: 920 aacacctacgatgatcgttcctatgataatcgcggcagttatggtggttctcgtggtggt 979
Query: 301 tacggtggtcgcaacggcagtaacaactctcgcggtggacgaggaggaaatcgaagtgtt 360
|| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 980 tatggtggtcgcaatggcagtaacaactctcgcggtggaagaggaggaaatcgaagtgtt 1039
Query: 361 caatgccagatttgcaaga 379
|||||||||||||||||||
Sbjct: 1040 caatgccagatttgcaaga 1058
>gnl|LJGI|BW609805 weakly similar to UniRef100_A8QCR8 Cluster: Zn-finger in Ran
binding protein and others containing protein; n=1;
Brugia malayi|Rep: Zn-finger in Ran binding protein and
others containing protein - Brugia malayi (Filarial
nematode worm), partial (5%)
Length = 489
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 16 agtcgcgagttcccttgcacgatctcgcaagctgaagctatggttatcgcgcatgaagcg 75
||||||||||| || || ||||||||||||| ||||| ||||| || ||||| ||||||
Sbjct: 473 agtcgcgagtttccgtgttcgatctcgcaagcagaagcgatggtgattgcgcacgaagcg 414
Query: 76 cgt 78
|||
Sbjct: 413 cgt 411
>gnl|LJGI|TC59992 similar to UniRef100_A7PHU4 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 1760
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 16 agtcgcgagttcccttgcacgatctcgcaagctgaagctatggttatcgcgcatgaagcg 75
||||||||||| || || ||||||||||||| ||||| ||||| || ||||| ||||||
Sbjct: 1369 agtcgcgagtttccgtgttcgatctcgcaagcagaagcgatggtgattgcgcacgaagcg 1428
Query: 76 cgt 78
|||
Sbjct: 1429 cgt 1431