Miyakogusa Predicted Gene
- Lj6g3v1094850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1094850.1 Non Chatacterized Hit- tr|I1MHT6|I1MHT6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56638
PE,87.76,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; NONSENSE-MEDIATED MRNA
DECAY PROTEIN 2 (UP-FRAMESHIFT SUPPRESSOR,CUFF.59123.1
(3627 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65464 similar to UniRef100_Q2HSQ9 Cluster: Initiation... 969 0.0
gnl|LJGI|TC75870 similar to UniRef100_Q2HSQ9 Cluster: Initiation... 769 0.0
gnl|LJGI|GO034178 similar to UniRef100_Q2HSQ9 Cluster: Initiatio... 722 0.0
>gnl|LJGI|TC65464 similar to UniRef100_Q2HSQ9 Cluster: Initiation factor eIF-4 gamma,
middle; Up-frameshift suppressor 2; n=1; Medicago
truncatula|Rep: Initiation factor eIF-4 gamma, middle;
Up-frameshift suppressor 2 - Medicago truncatula (Barrel
medic), partial (13%)
Length = 650
Score = 969 bits (489), Expect = 0.0
Identities = 489/489 (100%)
Strand = Plus / Plus
Query: 1 atggatcaacatgaggatgaatgccgcaccggaggcgaaagtaacagcaaacaagatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atggatcaacatgaggatgaatgccgcaccggaggcgaaagtaacagcaaacaagatgat 221
Query: 61 gaggaagccgttgctcaccttgaggaaataaagaagtcaattgaggcgaagatcgcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gaggaagccgttgctcaccttgaggaaataaagaagtcaattgaggcgaagatcgcttta 281
Query: 121 cgacaaagcaatttgaatcccgacaggcccgactcaggatttttaaggacattggattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cgacaaagcaatttgaatcccgacaggcccgactcaggatttttaaggacattggattct 341
Query: 181 agtattaagcgcaacacggctgttattaagaaactgaagcagattaatgaagagctgcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agtattaagcgcaacacggctgttattaagaaactgaagcagattaatgaagagctgcgt 401
Query: 241 gaagcactgatggacgagttacgaactgtcaacatgagcaaatttgtcagtgaagcagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gaagcactgatggacgagttacgaactgtcaacatgagcaaatttgtcagtgaagcagtg 461
Query: 301 gcggctatatgtgatgccaaacttaggagttctgatatacaagcagcagtccagatctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gcggctatatgtgatgccaaacttaggagttctgatatacaagcagcagtccagatctgc 521
Query: 361 tctttgcttcaccaaaggtacaaggactttgcaccaagcctgattcaaggacttctcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tctttgcttcaccaaaggtacaaggactttgcaccaagcctgattcaaggacttctcaaa 581
Query: 421 atcttctctcctggaaaacctggtgatgaatccgatactgacaaaaacttgaaggcaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atcttctctcctggaaaacctggtgatgaatccgatactgacaaaaacttgaaggcaatg 641
Query: 481 aagaagcgc 489
|||||||||
Sbjct: 642 aagaagcgc 650
>gnl|LJGI|TC75870 similar to UniRef100_Q2HSQ9 Cluster: Initiation factor eIF-4 gamma,
middle; Up-frameshift suppressor 2; n=1; Medicago
truncatula|Rep: Initiation factor eIF-4 gamma, middle;
Up-frameshift suppressor 2 - Medicago truncatula (Barrel
medic), partial (10%)
Length = 1158
Score = 769 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Plus
Query: 3240 tggggaaagtggtgatgaggccctggatgaggatactgatggaaacaaagaagtccaagt 3299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tggggaaagtggtgatgaggccctggatgaggatactgatggaaacaaagaagtccaagt 61
Query: 3300 gaaagttcttgtgaaacgtgggaacaagcaacagacaaagcagatgtacatcccacgcaa 3359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gaaagttcttgtgaaacgtgggaacaagcaacagacaaagcagatgtacatcccacgcaa 121
Query: 3360 ttcgtcactggtgcagagtacaaaacagaaagaagcagccgaacttcaagagaaagaaga 3419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttcgtcactggtgcagagtacaaaacagaaagaagcagccgaacttcaagagaaagaaga 181
Query: 3420 tattaagaggcttgtcttggagtataatgatagagaagaggaggagcttaatggattagg 3479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tattaagaggcttgtcttggagtataatgatagagaagaggaggagcttaatggattagg 241
Query: 3480 gacccagccaacaaactggatgcagagtgggggttataggggtggtggtcgtggctacac 3539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gacccagccaacaaactggatgcagagtgggggttataggggtggtggtcgtggctacac 301
Query: 3540 ttcagaaggaaccggtggcagaagtggtggatcacgccatcggcatcattatcccggaag 3599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttcagaaggaaccggtggcagaagtggtggatcacgccatcggcatcattatcccggaag 361
Query: 3600 tggcttctactatagcagaagaaggtaa 3627
||||||||||||||||||||||||||||
Sbjct: 362 tggcttctactatagcagaagaaggtaa 389
>gnl|LJGI|GO034178 similar to UniRef100_Q2HSQ9 Cluster: Initiation factor eIF-4 gamma,
middle; Up-frameshift suppressor 2; n=1; Medicago
truncatula|Rep: Initiation factor eIF-4 gamma, middle;
Up-frameshift suppressor 2 - Medicago truncatula (Barrel
medic), partial (20%)
Length = 736
Score = 722 bits (364), Expect = 0.0
Identities = 364/364 (100%)
Strand = Plus / Plus
Query: 3012 agggcctggacctgcttctgatgaggaagatgaagtccatgtaagacagaaggtgacaga 3071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agggcctggacctgcttctgatgaggaagatgaagtccatgtaagacagaaggtgacaga 432
Query: 3072 ggtggaccctctggaagaagccagttttgatcaagagctcaaggctgtattacaggagag 3131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggtggaccctctggaagaagccagttttgatcaagagctcaaggctgtattacaggagag 492
Query: 3132 tatggaacagcgaaggctggagctacgaggccgtcctacattgaatatgatgattccaat 3191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tatggaacagcgaaggctggagctacgaggccgtcctacattgaatatgatgattccaat 552
Query: 3192 gaatgtatttgagggatctgccaaggatcatcacgggagaggaactggtggggaaagtgg 3251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gaatgtatttgagggatctgccaaggatcatcacgggagaggaactggtggggaaagtgg 612
Query: 3252 tgatgaggccctggatgaggatactgatggaaacaaagaagtccaagtgaaagttcttgt 3311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgatgaggccctggatgaggatactgatggaaacaaagaagtccaagtgaaagttcttgt 672
Query: 3312 gaaacgtgggaacaagcaacagacaaagcagatgtacatcccacgcaattcgtcactggt 3371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gaaacgtgggaacaagcaacagacaaagcagatgtacatcccacgcaattcgtcactggt 732
Query: 3372 gcag 3375
||||
Sbjct: 733 gcag 736
Score = 553 bits (279), Expect = e-156
Identities = 279/279 (100%)
Strand = Plus / Plus
Query: 2641 ctggatgtcgaatttgacttgcaggatctgtttgtggacttgcgtcccaatatggttcgt 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctggatgtcgaatttgacttgcaggatctgtttgtggacttgcgtcccaatatggttcgt 61
Query: 2701 tactcttctattgaggaagtgaatgcagctctagtagaacttgaggagcatgatcgcatt 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tactcttctattgaggaagtgaatgcagctctagtagaacttgaggagcatgatcgcatt 121
Query: 2761 gtttctgctgataaggccagtggtgaaaaacagtctgagaagcctccaagaaggaccact 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtttctgctgataaggccagtggtgaaaaacagtctgagaagcctccaagaaggaccact 181
Query: 2821 tcctccatggtcgttggcaatggacaaagcattgataatggtgcagaggacaacggagtg 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcctccatggtcgttggcaatggacaaagcattgataatggtgcagaggacaacggagtg 241
Query: 2881 caagatgatgttaatgacggtgaggctgattcaggtagc 2919
|||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caagatgatgttaatgacggtgaggctgattcaggtagc 280