Miyakogusa Predicted Gene

Lj6g3v1094760.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1094760.1 Non Chatacterized Hit- tr|I1MY66|I1MY66_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.89,0.0000000002,PYRUVATE DEHYDROGENASE E1 COMPONENT, BETA
SUBUNIT,NULL; DEHYDROGENASE RELATED,NULL; no
description,N,CUFF.59096.1
         (363 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65614 similar to UniRef100_A7R2A7 Cluster: Chromosome...   720   0.0  
gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate d...   174   2e-43
gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromoso...   174   2e-43

>gnl|LJGI|TC65614 similar to UniRef100_A7R2A7 Cluster: Chromosome undetermined
           scaffold_411, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_411,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (8%)
          Length = 776

 Score =  720 bits (363), Expect = 0.0
 Identities = 363/363 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcctaaagcgagaggggacttctaccgatcggggtatgaggggtcaaatacagtcaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atgcctaaagcgagaggggacttctaccgatcggggtatgaggggtcaaatacagtcaga 226

                                                                       
Query: 61  ttcaatgcagataggacttgctatgcaacatttgggtgtcgaacaatgttgacactgcgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ttcaatgcagataggacttgctatgcaacatttgggtgtcgaacaatgttgacactgcgt 286

                                                                       
Query: 121 atgggacagtcttatgcagtatcagttgtgaatgttggaccagcaatttatatttctcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 atgggacagtcttatgcagtatcagttgtgaatgttggaccagcaatttatatttctcca 346

                                                                       
Query: 181 tcagggccaaatcctataatggtgcagatgacagtgagagaggctctcaactccgcactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tcagggccaaatcctataatggtgcagatgacagtgagagaggctctcaactccgcactt 406

                                                                       
Query: 241 gatgaggaaatgtcagcaaatcctaaagtcttcttgatgggtgaagaggttggggaatat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gatgaggaaatgtcagcaaatcctaaagtcttcttgatgggtgaagaggttggggaatat 466

                                                                       
Query: 301 ctaacctttaacccttccagctcatgtgatgaaaataacaatcgtttaaatcagagaaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ctaacctttaacccttccagctcatgtgatgaaaataacaatcgtttaaatcagagaaca 526

              
Query: 361 tga 363
           |||
Sbjct: 527 tga 529


>gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate dehydrogenase E1
           component subunit beta, mitochondrial precursor; n=1;
           Pisum sativum|Rep: Pyruvate dehydrogenase E1 component
           subunit beta, mitochondrial precursor - Pisum sativum
           (Garden pea), partial (35%)
          Length = 643

 Score =  174 bits (88), Expect = 2e-43
 Identities = 94/96 (97%)
 Strand = Plus / Plus

                                                                       
Query: 206 agatgacagtgagagaggctctcaactccgcacttgatgaggaaatgtcagcaaatccta 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 327 agatgacagtgagagaggctctcaactccgcacttgatgaggaaatgtcagcagatccta 386

                                               
Query: 266 aagtcttcttgatgggtgaagaggttggggaatatc 301
           |||||||||||||||||||||||||||| |||||||
Sbjct: 387 aagtcttcttgatgggtgaagaggttggagaatatc 422


>gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromosome chr1
           scaffold_180, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_180, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 1651

 Score =  174 bits (88), Expect = 2e-43
 Identities = 94/96 (97%)
 Strand = Plus / Plus

                                                                       
Query: 206 agatgacagtgagagaggctctcaactccgcacttgatgaggaaatgtcagcaaatccta 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 271 agatgacagtgagagaggctctcaactccgcacttgatgaggaaatgtcagcagatccta 330

                                               
Query: 266 aagtcttcttgatgggtgaagaggttggggaatatc 301
           |||||||||||||||||||||||||||| |||||||
Sbjct: 331 aagtcttcttgatgggtgaagaggttggagaatatc 366