Miyakogusa Predicted Gene

Lj6g3v1093600.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1093600.1 Non Chatacterized Hit- tr|I1MHV4|I1MHV4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.42,0,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; seg,NULL; PPR:
pentatri,CUFF.59084.1
         (2161 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP074829 similar to UniRef100_A7PTG0 Cluster: Chromosom...   230   3e-59

>gnl|LJGI|BP074829 similar to UniRef100_A7PTG0 Cluster: Chromosome chr8 scaffold_29,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_29, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (6%)
          Length = 458

 Score =  230 bits (116), Expect = 3e-59
 Identities = 131/136 (96%)
 Strand = Plus / Minus

                                                                        
Query: 2026 caagtacacgagtttcgtgttgcagatcaatctcatccaagatcggtggatatatattcg 2085
            |||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||||||
Sbjct: 458  caagtacacgagcttcgtgttgcagatccatctcatccagactcggtggatatatattcg 399

                                                                        
Query: 2086 atattgaaagtaatggagttggaagcaggggatctggaggatgatcttgaactctttgag 2145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398  atattgaaagtaatggagttggaagcaggggatctggaggatgatcttgaactctttgag 339

                            
Query: 2146 cctcatatcatttaag 2161
            ||||||||||||||||
Sbjct: 338  cctcatatcatttaag 323