Miyakogusa Predicted Gene
- Lj6g3v1093440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1093440.1 Non Chatacterized Hit- tr|I1P1Y6|I1P1Y6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,25.99,0.000000000009,seg,NULL; CGI-12 PROTEIN-RELATED,NULL;
Mitochondrial termination factor repeats,Mitochodrial
transcr,gene.g65726.t1.1
(1087 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76152 similar to UniRef100_A7Q179 Cluster: Chromosome... 910 0.0
gnl|LJGI|TC73630 similar to UniRef100_A7Q179 Cluster: Chromosome... 644 0.0
gnl|LJGI|AV774579 similar to UniRef100_A7Q179 Cluster: Chromosom... 88 1e-16
>gnl|LJGI|TC76152 similar to UniRef100_A7Q179 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 469
Score = 910 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Plus
Query: 180 catgtccccagctgcaggagctgtagcattgcactcttccctgtgcacaatctctcctga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 catgtccccagctgcaggagctgtagcattgcactcttccctgtgcacaatctctcctga 70
Query: 240 taaaccatcacctccttccacctcaaccaccctgctgattaccaaacccaaaagcctcct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 taaaccatcacctccttccacctcaaccaccctgctgattaccaaacccaaaagcctcct 130
Query: 300 tcaaaaccatccactttacacaccaacaacccatgcaaaactctcccttcagttcaaaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tcaaaaccatccactttacacaccaacaacccatgcaaaactctcccttcagttcaaaga 190
Query: 360 gaaaatcctctgccttgaggtaatgggtgttgatgcagggagagcactgtctcaaaaccc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gaaaatcctctgccttgaggtaatgggtgttgatgcagggagagcactgtctcaaaaccc 250
Query: 420 tgacctccggacagccaccatggaatccattcaatccatcatcagcttccttctctccaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgacctccggacagccaccatggaatccattcaatccatcatcagcttccttctctccaa 310
Query: 480 aggcatccagcacaaggacttgccaagaatctttggcatgtgccccaagattctcacctc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aggcatccagcacaaggacttgccaagaatctttggcatgtgccccaagattctcacctc 370
Query: 540 tgacatcaaaactgaactcaaccctgtttttgattttctcctgcatgacctcaaagtccc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgacatcaaaactgaactcaaccctgtttttgattttctcctgcatgacctcaaagtccc 430
Query: 600 agattacaatttcaggaaggttatcaataaatgtccaag 638
|||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agattacaatttcaggaaggttatcaataaatgtccaag 469
>gnl|LJGI|TC73630 similar to UniRef100_A7Q179 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 607
Score = 644 bits (325), Expect = 0.0
Identities = 343/349 (98%)
Strand = Plus / Plus
Query: 739 gttctgttggtgtctaatgtagaaaggaccctgatccccaagttggagtatttggagaac 798
|||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||
Sbjct: 1 gttctgttggtgtctaatgtagaaaggaccgtgatccccaacctggagtatgtggagaac 60
Query: 799 ttggggttttctaagggggaggctagaagtttggtgttgaggtgtccagcattgttcact 858
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 61 ttggggttttctaagggggaggctagaagtttggttttgaggtgtccagccttgttcact 120
Query: 859 ttcagcatagaaaataattttgagcctaagtttgagtactttgctggggaaatggggagg 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcagcatagaaaataattttgagcctaagtttgagtactttgctggggaaatggggagg 180
Query: 919 aaattggaggagctgaaggaatttcctcagtactttgcttttagtttggagaacaggata 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaattggaggagctgaaggaatttcctcagtactttgcttttagtttggagaacaggata 240
Query: 979 aagcctaggcacatggaggttgtgcaatgtgggatcaatttacctttgtcagtgatgctt 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagcctaggcacatggaggttgtgcaatgtgggatcaatttacctttgtcagtgatgctt 300
Query: 1039 aaaagcactgatgaagaatttagggagctgataaagcagggggatggat 1087
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaagcactgatgaagaatttagggagctgataaagcagggggatggat 349
>gnl|LJGI|AV774579 similar to UniRef100_A7Q179 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 425
Score = 87.7 bits (44), Expect = 1e-16
Identities = 117/136 (86%), Gaps = 4/136 (2%)
Strand = Plus / Minus
Query: 935 aggaatttcctcagtactttgcttttagtttggagaacaggataaagcctaggcacatgg 994
|||||||||||| |||| |||||||||||||||| | | || |||||||||||| ||
Sbjct: 425 aggaatttcctccgtaccctgcttttagtttggagtcccg-atcaagcctaggcacc-gg 368
Query: 995 aggttgtgcaatgtgggatcaatttacctttgtcagtgat-gcttaaaagcactgatgaa 1053
|| ||| || |||||||||| | ||||||||| | |||| |||||||||||||||||||
Sbjct: 367 agcttgggccatgtgggatccagttacctttgccc-tgatcgcttaaaagcactgatgaa 309
Query: 1054 gaatttagggagctga 1069
||||||||||||||||
Sbjct: 308 gaatttagggagctga 293