Miyakogusa Predicted Gene
- Lj6g3v1088970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1088970.1 tr|B7FPA7|B7FPA7_PHATC Peptidyl-prolyl cis-trans
isomerase (Fragment) OS=Phaeodactylum tricornutum
(,31.47,2e-16,Cyclophilin-like,Cyclophilin-like peptidyl-prolyl
cis-trans isomerase domain; CSA_PPIASE_2,Cyclophil,CUFF.59044.1
(855 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO009834 similar to UniRef100_A5AMZ9 Cluster: Peptidyl-... 777 0.0
gnl|LJGI|AV419448 similar to UniRef100_A8MQM4 Cluster: Uncharact... 533 e-151
gnl|LJGI|GO016325 similar to UniRef100_A7PPK0 Cluster: Chromosom... 72 6e-12
>gnl|LJGI|GO009834 similar to UniRef100_A5AMZ9 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=2; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(37%)
Length = 547
Score = 777 bits (392), Expect = 0.0
Identities = 408/411 (99%), Gaps = 3/411 (0%)
Strand = Plus / Plus
Query: 445 accgaaacgataaaccctaacgcattcgccctcacgcattccggtcccggcgtcgtttcg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 accgaaacgataaaccctaacgcattcgccctcacgcattccggtcccggcgtcgtttcg 61
Query: 505 ctctccctctccgaaaacgatgacgacgaagaaatcaagcttgacccattgtaccggaac 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctctccctctccgaaaacgatgacgacgaagaaatcaagcttgacccattgtaccggaac 121
Query: 565 gttgagttcttgatcaccaccgggcctggaccttgccctgaccttgataacaagaacatt 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gttgagttcttgatcaccaccgggcctggaccttgccctgaccttgataacaagaacatt 181
Query: 625 gtctttggaaccgtgcttgaagggttggatgttatcacagccattgcttcaattcctact 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtctttggaaccgtgcttgaagggttggatgttatcacagccattgcttcaattcctact 241
Query: 685 tacaaaccgtctgaaaggattcggcaatttaatgacttggctgagttttttggagatgac 744
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 242 tacaaaccgtctgaaaggattcggcaatttaatgacttggctgag-tttttggagatgac 300
Query: 745 agggcacagaatgctcgttctatatggaacaagcctctgaagattgtctatattagtgac 804
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agggcacagaatgctcgttc--tatggaacaagcctctgaagattgtctatattagtgac 358
Query: 805 tgtggggagctcaaagttgcaaagccttccctcactccttctctcccttga 855
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgtggggagctcaaagttgcaaagccttccctcactccttctctcccttga 409
>gnl|LJGI|AV419448 similar to UniRef100_A8MQM4 Cluster: Uncharacterized protein
At5g35100.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At5g35100.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (33%)
Length = 412
Score = 533 bits (269), Expect = e-151
Identities = 272/273 (99%)
Strand = Plus / Plus
Query: 146 tcaccgaccgcgtcttcatggacttcagcctctgccccacctccttcctccccaaccgcg 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tcaccgaccgcgtcttcatggacttcagcctctgccccacctccttcctccccaaccgcg 199
Query: 206 acaccgtctgctccgactccacccctctcggccgcgtcgtccttggcctctacggcaacc 265
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 200 acaccgtctgctccgactccacccctctcggccgcgttgtccttggcctctacggcaacc 259
Query: 266 tcgtccccctcaccgtctccaatttcaaatccctctgcctcgcttcctccgacccctcct 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcgtccccctcaccgtctccaatttcaaatccctctgcctcgcttcctccgacccctcct 319
Query: 326 cctcctcctacaaaaacaccctcgtccacaagctcttccccggccgctacttcctcgccg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctcctcctacaaaaacaccctcgtccacaagctcttccccggccgctacttcctcgccg 379
Query: 386 gccgccagggtagacccgacaagggcgaggtcc 418
|||||||||||||||||||||||||||||||||
Sbjct: 380 gccgccagggtagacccgacaagggcgaggtcc 412
>gnl|LJGI|GO016325 similar to UniRef100_A7PPK0 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 910
Score = 71.9 bits (36), Expect = 6e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 808 ggggagctcaaagttgcaaagccttccctcactccttctctcccttga 855
||||||||||||||||||||||| || |||| ||||||||||||||||
Sbjct: 177 ggggagctcaaagttgcaaagccctctctcagtccttctctcccttga 130