Miyakogusa Predicted Gene

Lj6g3v1088860.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1088860.1 Non Chatacterized Hit- tr|A5ADQ7|A5ADQ7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,32.34,1e-18,FAMILY NOT NAMED,NULL; LEURICHRPT,NULL;
LRR_1,Leucine-rich repeat; LRR_6,NULL; no description,NULL;
,CUFF.59025.1
         (1378 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS322006 weakly similar to UniRef100_A7P9S7 Cluster: Ch...    70   4e-11

>gnl|LJGI|FS322006 weakly similar to UniRef100_A7P9S7 Cluster: Chromosome chr14
           scaffold_9, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 715

 Score = 69.9 bits (35), Expect = 4e-11
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 283 ataaatttgtcttctaacaaattatccggtgtcattccaagctcatttggtaacctttcc 342
           ||||||||||| || ||||||||||| || ||  |||||||||||||||| || ||||||
Sbjct: 175 ataaatttgtcatcaaacaaattatctggcgtgtttccaagctcatttgggaatctttcc 234

                                          
Query: 343 actttggcatggttgcatttgaacaataaca 373
            | |||  ||||||||||||  |||||||||
Sbjct: 235 gcattgaaatggttgcatttagacaataaca 265



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 534 cattccatcacaattgtgccaactttctacactgcaaatattggacctttc 584
           |||||| |||||||| ||||||||| |  |||||||||| |||||||||||
Sbjct: 426 cattccttcacaattatgccaacttacatcactgcaaattttggacctttc 476