Miyakogusa Predicted Gene
- Lj6g3v1078470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1078470.1 Non Chatacterized Hit- tr|I1L2C9|I1L2C9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,69.65,0,Fip1,Pre-mRNA
polyadenylation factor Fip1; seg,NULL,CUFF.59108.1
(3969 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP064891 similar to UniRef100_A6ZXS6 Cluster: Stp1p-lik... 850 0.0
gnl|LJGI|BP070010 similar to UniRef100_Q9FGU0 Cluster: Genomic D... 741 0.0
gnl|LJGI|DC595099 739 0.0
gnl|LJGI|BW616392 617 e-175
>gnl|LJGI|BP064891 similar to UniRef100_A6ZXS6 Cluster: Stp1p-like protein; n=1;
Saccharomyces cerevisiae YJM789|Rep: Stp1p-like protein
-, partial (3%)
Length = 480
Score = 850 bits (429), Expect = 0.0
Identities = 472/482 (97%), Gaps = 4/482 (0%)
Strand = Plus / Plus
Query: 2038 ctcgaggatgggatagaaaagaaacagaaattaacatctgaagttgagcaacc-tttgct 2096
||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||
Sbjct: 2 ctcgaggatgggatagaaaagaaacagaaatta-ca-ctgaagttgagcaaccctttgct 59
Query: 2097 tgatgaggttgatgattgggaggactcaaaaactgccagaagcagtgataacagcaaagc 2156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tgatgaggttgatgattgggaggactcaaaaactgccagaagcagtgataacagcaaagc 119
Query: 2157 aagatcagcgggaagcagggataaccagaagcagcgagagagtctcgatgaagaagtagt 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aagatcagcgggaagcagggataaccagaagcagcgagagagtctcgatgaagaagtagt 179
Query: 2217 tcaggatccaagatcagcacaggtggatagcataagacaaccccctgatgaaaatgagca 2276
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 180 tcaggatccaagatcagcacaggtggatagcataagacaancccctgatgaaaatgagca 239
Query: 2277 gggattccatagaagagagcgtgacggaaagcaagaacctgagagaaatcgcatggtact 2336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gggattccatagaagagagcgtgacggaaagcaagaacctgagagaaatcgcatggtact 299
Query: 2337 taaaggtagagagggatcatacccttacaaggatcggcatcgtagctcagttcacgcaaa 2396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 taaaggtagagagggatcatacccttacaaggatcggcatcgtagctcagttcacgcaaa 359
Query: 2397 tactgatggatttgatagacaaaaagatagggacaattctgacatggattgggcagggag 2456
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 360 tactgatgagtttgatagacaaaaagatagggacaattctgacatggattgggcaggang 419
Query: 2457 agatgatgacctctttagcagaagggttagaaatgatgaacctagaaagagggatagagc 2516
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aga-gatgacctctttancagaagggttagaaatgatgaacctagaaagagggatagagc 478
Query: 2517 ta 2518
||
Sbjct: 479 ta 480
>gnl|LJGI|BP070010 similar to UniRef100_Q9FGU0 Cluster: Genomic DNA, chromosome 5, TAC
clone:K21L19; n=1; Arabidopsis thaliana|Rep: Genomic
DNA, chromosome 5, TAC clone:K21L19 - Arabidopsis
thaliana (Mouse-ear cress), partial (5%)
Length = 519
Score = 741 bits (374), Expect = 0.0
Identities = 377/378 (99%)
Strand = Plus / Minus
Query: 379 gatgctatggatgtggatggcggtactgccggcggcggcgggggaggtgagggcgatgat 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gatgctatggatgtggatggcggtactgccggcggcggcgggggaggtgagggcgatgat 460
Query: 439 tgggacagtgacagcgaggatgatttgcagatagtgttgaacgatgacaaccgcatggct 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tgggacagtgacagcgaggatgatttgcagatagtgttgaacgatgacaaccgcatggct 400
Query: 499 atggaaaggggaggggtggtggatgatgatgacgaggatgaagatggagggcttgtgatt 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atggaaaggggaggggtggtggatgatgatgacgaggatgaagatggagggcttgtgatt 340
Query: 559 gtggcgggtggtgatccgagtcagggcttggaggagcaagattggggaaacaatgcgacg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtggcgggtggtgatccgagtcagggcttggaggagcaagattggggaaacaatgcgacg 280
Query: 619 ctagcggcggacggcgaggggaaggacgctgcggaattggcaaagaatgctgctgctgtt 678
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctagtggcggacggcgaggggaaggacgctgcggaattggcaaagaatgctgctgctgtt 220
Query: 679 ggtggtggcggtgtggctgcggtgcccaaaattgggtatggtggtcatgggtatcatccg 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ggtggtggcggtgtggctgcggtgcccaaaattgggtatggtggtcatgggtatcatccg 160
Query: 739 tttcattcccagtttaag 756
||||||||||||||||||
Sbjct: 159 tttcattcccagtttaag 142
>gnl|LJGI|DC595099
Length = 572
Score = 739 bits (373), Expect = 0.0
Identities = 383/387 (98%)
Strand = Plus / Plus
Query: 1 atggaagacgatgacgagttcggagatttgtacaccgacgttctccgccccttcgctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atggaagacgatgacgagttcggagatttgtacaccgacgttctccgccccttcgctatc 245
Query: 61 tccgaccaccactctcctcaaccgaccaccaccatcgatctcaaccagatcccctccgcc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 246 tccgaccaccactctcctcaaccgaccactaccatcgatctcaaccagatcccctccgcc 305
Query: 121 gcgccccacgatacacccccgccctccaccaatcaaaaccaacctggatcacccgagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcgccccacgatacacccccgccctccaccaatcaaaaccaacctggatcacccgagatt 365
Query: 181 gctcccgaattaccacctagggtttcacctcaacccgacccggttgaagctctcaacgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gctcccgaattaccacctagggtttcacctcaacccgacccggttgaagctctcaacgat 425
Query: 241 ggcggcggggaggaggctggtgatgatgctgcagcaaacgcaatcgatccgatggatcga 300
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 426 ggcggcggggaggaggctggtgatgatgctgcancanacgcaatcgatccgatggatcga 485
Query: 301 gacgtgaagttcgacatcgaggaggatgacggaggtggtgctgccttagagccggttatc 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 486 gacgtgaagttcgacatcgaggaggatgacggaggtggtgctgccttaaagccggttatc 545
Query: 361 cctggactttcaggcggggatgctatg 387
|||||||||||||||||||||||||||
Sbjct: 546 cctggactttcaggcggggatgctatg 572
>gnl|LJGI|BW616392
Length = 482
Score = 617 bits (311), Expect = e-175
Identities = 311/311 (100%)
Strand = Plus / Plus
Query: 1 atggaagacgatgacgagttcggagatttgtacaccgacgttctccgccccttcgctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atggaagacgatgacgagttcggagatttgtacaccgacgttctccgccccttcgctatc 231
Query: 61 tccgaccaccactctcctcaaccgaccaccaccatcgatctcaaccagatcccctccgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tccgaccaccactctcctcaaccgaccaccaccatcgatctcaaccagatcccctccgcc 291
Query: 121 gcgccccacgatacacccccgccctccaccaatcaaaaccaacctggatcacccgagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gcgccccacgatacacccccgccctccaccaatcaaaaccaacctggatcacccgagatt 351
Query: 181 gctcccgaattaccacctagggtttcacctcaacccgacccggttgaagctctcaacgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gctcccgaattaccacctagggtttcacctcaacccgacccggttgaagctctcaacgat 411
Query: 241 ggcggcggggaggaggctggtgatgatgctgcagcaaacgcaatcgatccgatggatcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggcggcggggaggaggctggtgatgatgctgcagcaaacgcaatcgatccgatggatcga 471
Query: 301 gacgtgaagtt 311
|||||||||||
Sbjct: 472 gacgtgaagtt 482