Miyakogusa Predicted Gene
- Lj6g3v1078260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1078260.1 tr|B9IK23|B9IK23_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_577692 PE=4
SV=1,54.69,0.0000000000003,WRKY,DNA-binding WRKY; DNA binding
domain,DNA-binding WRKY; no description,DNA-binding WRKY; WRKY
DN,CUFF.58997.1
(1371 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72364 weakly similar to UniRef100_A7LHI1 Cluster: WRK... 1291 0.0
gnl|LJGI|TC66806 similar to UniRef100_A7LHG7 Cluster: WRKY24; n=... 1277 0.0
gnl|LJGI|TC75441 similar to UniRef100_A7PFS4 Cluster: Chromosome... 634 0.0
gnl|LJGI|BP086025 UniRef100_A7PFS4 Cluster: Chromosome chr11 sca... 78 2e-13
>gnl|LJGI|TC72364 weakly similar to UniRef100_A7LHI1 Cluster: WRKY44; n=1; Glycine
max|Rep: WRKY44 - Glycine max (Soybean), partial (56%)
Length = 787
Score = 1291 bits (651), Expect = 0.0
Identities = 654/655 (99%)
Strand = Plus / Plus
Query: 1 atggccgagacggcgactccacgactcactcactcgccgccgccgccaccatccaccgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atggccgagacggcgactccacgactcactcactcgccgccgccgccaccatccaccgag 192
Query: 61 ttacgcacttccagtcctcccgatgaagcgcagcccaatttggaaaccctagctaccccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttacgcacttccagtcctcccgatgaagcgcagcccaatttggaaaccctagctaccccc 252
Query: 121 tcttcgccaccgcgccatcacaccgatcatttgcagggaagctccaccgcgcctgagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tcttcgccaccgcgccatcacaccgatcatttgcagggaagctccaccgcgcctgagaac 312
Query: 181 ggcaaagatgaaactgaggcgccagccaggcctccaggcaatgaaattattgtaaaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggcaaagatgaaactgaggcgccagccaggcctccaggcaatgaaattattgtaaaggac 372
Query: 241 gcagttgaggaacctcaagtggaaacaaagaaccaactccaggcgtgttcaactccattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gcagttgaggaacctcaagtggaaacaaagaaccaactccaggcgtgttcaactccattg 432
Query: 301 tctgcccctagtccaatggtaccagaacagagactttctcctccaaaggctaccagtgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tctgcccctagtccaatggtaccagaacagagactttctcctccaaaggctaccagtgta 492
Query: 361 tatgtgctggaagtagacaaaacaactccttcaagtggtacaactttttcttctgttcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tatgtgctggaagtagacaaaacaactccttcaagtggtacaactttttcttctgttcct 552
Query: 421 gttgcaaggtcatctgcaaccgatggatataattggcggaagtacggtcagaagcaagtg 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 553 gttgcaaggtcatctgcaaccgatggatataattggcggaagtatggtcagaagcaagtg 612
Query: 481 aaaagtcctattggttctcgaagctattacaggtgtactcattcagcttgttgtgctaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaaagtcctattggttctcgaagctattacaggtgtactcattcagcttgttgtgctaag 672
Query: 541 aaggttgaattctgtgaccattcaggtcatgtgtcggagattgtatataaaagtcaacac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aaggttgaattctgtgaccattcaggtcatgtgtcggagattgtatataaaagtcaacac 732
Query: 601 agtcatgatccaccacataaaactaatcctgctaaggaaagtaagtccctggctt 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 agtcatgatccaccacataaaactaatcctgctaaggaaagtaagtccctggctt 787
>gnl|LJGI|TC66806 similar to UniRef100_A7LHG7 Cluster: WRKY24; n=1; Glycine max|Rep:
WRKY24 - Glycine max (Soybean), partial (49%)
Length = 732
Score = 1277 bits (644), Expect = 0.0
Identities = 679/684 (99%), Gaps = 5/684 (0%)
Strand = Plus / Plus
Query: 615 acataaaactaatcctgctaaggaaagtaagtccctggcttccaaggaacctaatgtaga 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 acataaaactaatcctgctaaggaaagtaagtccctggcttccaaggaacctaatgtaga 61
Query: 675 aaacaccgttccaaagcagtctgtcaaagttctaaatgattctgatccatcaccttctcc 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaacaccgttccaaagcagtctgtcaaagttctaaatgattctgatccatcaccttctcc 121
Query: 735 gaaaaaccctcttcaagaagcacctcgcaatcctgataagaaacgacaaaactcatctga 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaaaaaccctcttcaagaagcacctcgcaatcctgataagaaacgacaaaactcatctga 181
Query: 795 cagtgggaatggtaaagttacttttaaggaagaggatattaacgagccagagctgaaaag 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagtgggaatggtaaagttacttttaaggaagaggatattaacgagccagagctgaaaag 241
Query: 855 aagaatgaagaaagatgattcaacatgcttggattcaccaataaaatctggaaagaaaca 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aagaatgaagaaagatgattcaacatgcttggattcaccaataaaatctggaaagaaaca 301
Query: 915 aaagtttgttgtacatgcggcaggggatgtggggatatcaggtgatgggtaccgatggcg 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaagtttgttgtacatgcggcaggggatgtggggatatcaggtgatgggtaccgatggcg 361
Query: 975 caagtatggacaaaaaatggtgaaggggaaacctcatcccagaaactactacagatgcac 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caagtatggacaaaaaatggtgaaggggaaacctcatcccagaaactactacagatgcac 421
Query: 1035 ttctgctggatgtcctgcccggaagcacattgagactgctgtggatgactcgaacgatgt 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttctgctggatgtcctgcccggaagcacattgagactgctgtggatgactcgaacgatgt 481
Query: 1095 catcatcacatacaagggagtacatgaccatgacatgcctgtgcctaagaaacgacatgg 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 catcatcacatacaagggagtacatgaccatgacatgcctgtgcctaagaaacgacatgg 541
Query: 1155 ccagccaaatgctccactcgtggctgctgcagcacctgcttcaatgagcaatttgcagct 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccagccaaatgctccactcgtggctgctgcagcacctgcttcaatgagcaatttgcagct 601
Query: 1215 catgaaaactgactcaccaaaaaaccagaaaaattctcaatgttccggggaaattggtgg 1274
|||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 602 catgaaaactgactcacc-aaaaaccag-aaaattctcaatgttcc-gggaaattggtgg 658
Query: 1275 agaattaactggggaagcctcgga 1298
|| ||||||||||| |||||||||
Sbjct: 659 ag-attaactgggg-agcctcgga 680
>gnl|LJGI|TC75441 similar to UniRef100_A7PFS4 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 522
Score = 634 bits (320), Expect = 0.0
Identities = 323/324 (99%)
Strand = Plus / Plus
Query: 1048 cctgcccggaagcacattgagactgctgtggatgactcgaacgatgtcatcatcacatac 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgcccggaagcacattgagactgctgtggatgactcgaacgatgtcatcatcacatac 60
Query: 1108 aagggagtacatgaccatgacatgcctgtgcctaagaaacgacatggccagccaaatgct 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 aagggagtacatgaccatgacatgcctgtgcctaagaaacgacatggccagccgaatgct 120
Query: 1168 ccactcgtggctgctgcagcacctgcttcaatgagcaatttgcagctcatgaaaactgac 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccactcgtggctgctgcagcacctgcttcaatgagcaatttgcagctcatgaaaactgac 180
Query: 1228 tcaccaaaaaaccagaaaaattctcaatgttccggggaaattggtggagaattaactggg 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaccaaaaaaccagaaaaattctcaatgttccggggaaattggtggagaattaactggg 240
Query: 1288 gaagcctcggaacttggtggtgagaaagcaattgaatcagctcgagctcttctgagcata 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagcctcggaacttggtggtgagaaagcaattgaatcagctcgagctcttctgagcata 300
Query: 1348 ggttttgaaattaaaccttgctga 1371
||||||||||||||||||||||||
Sbjct: 301 ggttttgaaattaaaccttgctga 324
>gnl|LJGI|BP086025 UniRef100_A7PFS4 Cluster: Chromosome chr11 scaffold_14, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_14, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (6%)
Length = 191
Score = 77.8 bits (39), Expect = 2e-13
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 1301 ttggtggtgagaaagcaattgaatcagctcgagctcttctgagcataggttttgaaatta 1360
|||| ||||||||||| || || ||||||||| | |||||||||||||| ||||||||||
Sbjct: 191 ttgggggtgagaaagccatggagtcagctcgaacgcttctgagcataggctttgaaatta 132
Query: 1361 aaccttgctga 1371
| |||||||||
Sbjct: 131 agccttgctga 121