Miyakogusa Predicted Gene
- Lj6g3v1078250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1078250.1 CUFF.59032.1
(1161 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59658 similar to UniRef100_A7PFS3 Cluster: Chromosome... 1392 0.0
gnl|LJGI|TC60411 similar to UniRef100_A7PFS3 Cluster: Chromosome... 274 1e-72
gnl|LJGI|TC80579 similar to UniRef100_A7PFS3 Cluster: Chromosome... 52 8e-06
>gnl|LJGI|TC59658 similar to UniRef100_A7PFS3 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 972
Score = 1392 bits (702), Expect = 0.0
Identities = 702/702 (100%)
Strand = Plus / Plus
Query: 460 tccaagaagaggtgtgcctgggtcactcccaatactgaaccatgttatgctactttccac 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tccaagaagaggtgtgcctgggtcactcccaatactgaaccatgttatgctactttccac 61
Query: 520 gatgaagaatggggagttccggtacatgatgacaagaaactatttgagctacttgtactt 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gatgaagaatggggagttccggtacatgatgacaagaaactatttgagctacttgtactt 121
Query: 580 tcgattgctctggctgaacttagttggccagtcattctaagcaaaaggcatagttttagg 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcgattgctctggctgaacttagttggccagtcattctaagcaaaaggcatagttttagg 181
Query: 640 gaagcttttgcagactttgatccggttgctgtgtcaaagttgaatgagaagaagatgatg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaagcttttgcagactttgatccggttgctgtgtcaaagttgaatgagaagaagatgatg 241
Query: 700 gcaccaggaacagttgcgagctccctactttctgagcttaaattacgtgctgtgatcgag 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcaccaggaacagttgcgagctccctactttctgagcttaaattacgtgctgtgatcgag 301
Query: 760 aatgcacgtcaaatatcaaaggtcatagatgagtttgggtcttttgacaagtacatttgg 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatgcacgtcaaatatcaaaggtcatagatgagtttgggtcttttgacaagtacatttgg 361
Query: 820 agttttgtgaaccataagccaatagttaacaggttccgctatccaagacaggtccctgtg 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agttttgtgaaccataagccaatagttaacaggttccgctatccaagacaggtccctgtg 421
Query: 880 aaaactccaaaggcagatgtcatcagcaaagacctggtgagaagaggtttccgtggcgtt 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaaactccaaaggcagatgtcatcagcaaagacctggtgagaagaggtttccgtggcgtt 481
Query: 940 ggccccacggtgatatattctttcatgcaggttgctggtttcaccaatgaccatctcatg 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggccccacggtgatatattctttcatgcaggttgctggtttcaccaatgaccatctcatg 541
Query: 1000 agctgcttcagattcccggagtgtattgctgcagctgaaggaaaggaagggaatggcatc 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agctgcttcagattcccggagtgtattgctgcagctgaaggaaaggaagggaatggcatc 601
Query: 1060 atggataatattaactctgaacaaaaggagggttgtgataacatgatggaatccaatctg 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atggataatattaactctgaacaaaaggagggttgtgataacatgatggaatccaatctg 661
Query: 1120 tctattgccattgatgaattgagtttctcctctgaatcctag 1161
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tctattgccattgatgaattgagtttctcctctgaatcctag 703
>gnl|LJGI|TC60411 similar to UniRef100_A7PFS3 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 981
Score = 274 bits (138), Expect = 1e-72
Identities = 144/146 (98%)
Strand = Plus / Plus
Query: 1 atgtctggagctcccagattgaggtctatgaatgttgctgattcagaggcaaggcctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 atgtctggagctcccagattgaggtctatgaatgttgctgattcagaggcaaggcctgtg 895
Query: 61 cttggaccagctggaaacaagacagggtctttgagttcaaggaaatcagcttcaaagcca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 896 cttggaccagctggaaacaagacagggtctttgagttcaaggaaatcagcttcaaaagca 955
Query: 121 ttgaggaaggttgataaattgctgga 146
||||||||||||||||||||||||||
Sbjct: 956 ttgaggaaggttgataaattgctgga 981
>gnl|LJGI|TC80579 similar to UniRef100_A7PFS3 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 637
Score = 52.0 bits (26), Expect = 8e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 760 aatgcacgtcaaatatcaaaggtcatagatgagtttgggtcttttgacaagtacatttgg 819
|||||||||||||| | ||||| || || ||||||||||| ||||||| | ||||||
Sbjct: 53 aatgcacgtcaaatgtgtaaggtaattgaggagtttgggtcctttgacacatttatttgg 112
Query: 820 agttttgtgaaccataagccaatagt 845
| |||||||| |||||||||||||
Sbjct: 113 aactttgtgaataataagccaatagt 138