Miyakogusa Predicted Gene
- Lj6g3v1077860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1077860.1 Non Chatacterized Hit- tr|I1KDE2|I1KDE2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,89.6,0,seg,NULL;
TRANSMEMBRANE 9 SUPERFAMILY PROTEIN,NULL; TRANSMEMBRANE 9 SUPERFAMILY
PROTEIN,Nonaspanin (,CUFF.58952.1
(1935 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58376 similar to UniRef100_A7P650 Cluster: Chromosome... 406 e-112
gnl|LJGI|BP033741 homologue to UniRef100_A7PFR7 Cluster: Chromos... 317 1e-85
gnl|LJGI|TC78937 similar to UniRef100_A7PFR7 Cluster: Chromosome... 214 2e-54
gnl|LJGI|TC66728 similar to UniRef100_A7PFR7 Cluster: Chromosome... 200 2e-50
gnl|LJGI|BP043644 similar to UniRef100_A7P650 Cluster: Chromosom... 196 4e-49
gnl|LJGI|BP074651 similar to UniRef100_A7PS47 Cluster: Chromosom... 96 1e-18
gnl|LJGI|FS324322 similar to UniRef100_A7P650 Cluster: Chromosom... 74 4e-12
gnl|LJGI|TC63961 homologue to UniRef100_A7P650 Cluster: Chromoso... 58 2e-07
>gnl|LJGI|TC58376 similar to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (97%)
Length = 2158
Score = 406 bits (205), Expect = e-112
Identities = 862/1081 (79%)
Strand = Plus / Plus
Query: 719 ctcctcaagaagttgaagacaagaaggaaattctttttacctatgatgttgaattccagg 778
|||||||||| |||||||| || ||||||||| | || || ||||||||||| |||||||
Sbjct: 763 ctcctcaagaggttgaagagaacaaggaaattatcttcacatatgatgttgatttccagg 822
Query: 779 agagtgatgtgaagtgggcatctcgctgggattcctatcttctaatggcagatgaccaaa 838
||||||||||||||||||| || | |||||| | ||| | || ||| ||||||||||
Sbjct: 823 agagtgatgtgaagtgggcttcaagatgggatgcatatttgctcatgaatgatgaccaaa 882
Query: 839 ttcactggttttccattattaactctttaatgattgtgcttttcctatccggcatggtgg 898
| |||||||| || ||| ||||||| ||||||||||| || ||||| || ||||||||||
Sbjct: 883 tccactggttctcaattgttaactccttaatgattgttctcttcctttcgggcatggtgg 942
Query: 899 ctatgataatgttgaggacactttaccgtgacatctcaaagtataatcaattagaaactc 958
| ||||| ||| || |||| || ||||||||||| |||| |||||| | | ||||| |
Sbjct: 943 caatgattatgctgcggaccctgtaccgtgacattgcaaaatataatgagcttgaaaccc 1002
Query: 959 aggaagaagctcaggaagagacagggtggaaacttgtacatggagatgttttcaggcctc 1018
|||||||||| || |||||||| || ||||||||||| ||||| ||||| || ||||| |
Sbjct: 1003 aggaagaagcccaagaagagactggttggaaacttgtccatggggatgtctttaggccgc 1062
Query: 1019 ctccaaactcagatttactgtgtgtatatgttggaacaggtgttcagttttttgggatga 1078
|| ||||||||||| |||||||| |||||||| || || |||||||| ||| |||||
Sbjct: 1063 ctagcaactcagatttgctgtgtgtttatgttgggactggcgttcagttcttttggatgg 1122
Query: 1079 ttcttgtaaccatgttgtttgctgcatttggatttctgtctccttccaatagaggagggt 1138
| || ||||||||| ||||||| | || || || |||||||| || |||| |||
Sbjct: 1123 tactggtaaccatgatgtttgcaatcctcgggttcctttctccttcaaaccgaggtgggc 1182
Query: 1139 tgatgaccgccatgctcttgctctgggcccttatggggctctctggtgggtattcttcgg 1198
| ||||| |||||||||||||| |||| | ||||| | | | ||| || || || |
Sbjct: 1183 taatgacagccatgctcttgctttgggtgttcatgggaattttcgctggttactcctcag 1242
Query: 1199 cacgtctctataagatgttcaaaggaacagaatggaagaaaatcactctcaagacagcag 1258
| || || || || |||||||||||| | || ||||| ||||| | |||| ||| |||
Sbjct: 1243 ctcgcctgtacaaaatgttcaaaggatcggactggaaaaaaattgccctcaggactgcaa 1302
Query: 1259 tcatgtttcctgctattgcctttgggatattctttgtgctaaatgctcttatctggggtc 1318
|||||| ||||| | || || | || |||||| | |||||||||| || ||||| |
Sbjct: 1303 ccatgttccctgcaactgtctctctcatcttctttatattaaatgctctcatatggggcc 1362
Query: 1319 agagatcttctggggctgtgccctttggtacaatgtttgctcttgttttcttatggtttg 1378
| | ||| ||||| |||||||| |||||||| ||||||||||| || || ||||||||||
Sbjct: 1363 aaaaatcatctggagctgtgccatttggtactatgtttgctctggtctttttatggtttg 1422
Query: 1379 gcatctcagttccacttgtgtttgttggtggtcacattggttttaagaaaaaagtgatcg 1438
| |||||||| |||||||| ||||| ||||| | |||| |||||||| | ||| |
Sbjct: 1423 ggatctcagtcccacttgtttttgtgggtggctatgttggatttaagaagcctgcgattg 1482
Query: 1439 aggatcctgtgaagacaagcaagatccccaggcagataccagagcagccttggtacatga 1498
|| |||||||||||||| ||| ||||| ||||||||||| |||||| | ||||||||||
Sbjct: 1483 agagtcctgtgaagacaaacaaaatcccaaggcagatacctgagcaggcctggtacatga 1542
Query: 1499 actcagtattctccattctaattggaggcatacttcccttcggcgccgtcttcatcgagc 1558
|| |||| ||||| || | ||||| || ||||| || ||||| || || ||||| ||||
Sbjct: 1543 acccagtcttctcagttttgattgggggaatactcccattcggagctgttttcattgagc 1602
Query: 1559 ttttcttcatcctcacgtctatctggttacatcagttttattacatatttgggttcctgt 1618
||||||||||||| || || ||||||||| |||||||||| ||||| ||||||||||| |
Sbjct: 1603 ttttcttcatccttacctcaatctggttaaatcagttttactacatctttgggttcctat 1662
Query: 1619 tcattgtgttcatcatcctcattgttacatgtgctgagatcacaatagttctctgctact 1678
| | || || |||||||||||||||| |||||||| || || || || ||||||||||
Sbjct: 1663 ttttggtcgtcctcatcctcattgttacctgtgctgaaataaccattgtgctctgctact 1722
Query: 1679 tccagctatgtagtgaggactataattggtggtggaggtcttacctgacttcaggttcct 1738
||||| | || |||||||| || ||||||||| |||| ||||| || || ||||| |
Sbjct: 1723 tccagttgtgcagtgaggattactcgtggtggtggcggtcatacctcacctctggttctt 1782
Query: 1739 ctgcactctatcttttcctgtatgctgcattttacttcttcacaaagcttgagatcacaa 1798
||||||| || || || || ||||| |||| ||||| ||||| ||||| || |||||||
Sbjct: 1783 ctgcactttacctctttctttatgcaacattctactttttcaccaagctggaaatcacaa 1842
Query: 1799 a 1799
|
Sbjct: 1843 a 1843
Score = 73.8 bits (37), Expect = 4e-12
Identities = 160/201 (79%)
Strand = Plus / Plus
Query: 235 agtgctgagaatcttggcgaagttcttcggggcgaccgcattgaaaactctccttacacg 294
|||||||| |||||||| ||||| ||||| || |||||||||||||| |||| ||| |
Sbjct: 276 agtgctgaaaatcttggggaagtgcttcgtggggaccgcattgaaaattctcgttatgtg 335
Query: 295 ttcaaaatgagggagccacagatgtgcaatgttgtttgtcgtctaactcttaatgcaaca 354
|| |||||| | |||||| | ||||||||| |||| ||| | | ||| |||| | |
Sbjct: 336 tttaaaatgcgcgagccagaaatgtgcaatattgtgtgtaagattaagcttgatgctaaa 395
Query: 355 acagccaaagagttcaaggaaaagatagatgatgaatatcgggtgaacatgattttagac 414
|| || |||| |||||| || ||||| ||||||| ||||||||||||||||| ||||
Sbjct: 396 actgcaaaagcgttcaaagagaagatcaatgatgagtatcgggtgaacatgatcctagat 455
Query: 415 aatcttcctttggttgttccc 435
|| |||||| | |||||||||
Sbjct: 456 aaccttcctctagttgttccc 476
>gnl|LJGI|BP033741 homologue to UniRef100_A7PFR7 Cluster: Chromosome chr11
scaffold_14, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_14, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 526
Score = 317 bits (160), Expect = 1e-85
Identities = 167/168 (99%), Gaps = 1/168 (0%)
Strand = Plus / Plus
Query: 128 agggggatctgctcaggg-tgaaagtgaacaaattatcttctacaaaaacacagcttcct 186
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 agggggatctgctcagggntgaaagtgaacaaattatcttctacaaaaacacagcttcct 128
Query: 187 tactcctactattcactgccttattgtcgtccagatcagattgttgacagtgctgagaat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tactcctactattcactgccttattgtcgtccagatcagattgttgacagtgctgagaat 188
Query: 247 cttggcgaagttcttcggggcgaccgcattgaaaactctccttacacg 294
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cttggcgaagttcttcggggcgaccgcattgaaaactctccttacacg 236
Score = 222 bits (112), Expect = 6e-57
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 294 gttcaaaatgagggagccacagatgtgcaatgttgtttgtcgtctaactcttaatgcaac 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gttcaaaatgagggagccacagatgtgcaatgttgtttgtcgtctaactcttaatgcaac 387
Query: 354 aacagccaaagagttcaaggaaaagatagatgatgaatatcgggtgaacatg 405
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aacagccaaagagttcaaggaaaagatagatgatgaatatcgggtgaacatg 439
>gnl|LJGI|TC78937 similar to UniRef100_A7PFR7 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 1046
Score = 214 bits (108), Expect = 2e-54
Identities = 136/144 (94%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 1360 cttgttttcttatggtttggcatctcagttccacttgtgtttgttggtggtcacattggt 1419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 218 cttgttttcttatggtttggcatctcagttccacttgtgtttgttggtggtcacattgat 277
Query: 1420 tttaagaaaaaagtgatcgaggatcctgtgaagacaagcaagatccccaggcagatacca 1479
||||| |||||||||||| |||||| |||| |||||||||| |||||| |||||||||||
Sbjct: 278 tttaa-aaaaaagtgatctaggatcttgtggagacaagcaaaatcccctggcagatacca 336
Query: 1480 gagcagccttggtacatgaactca 1503
||||||| ||||||||||||||||
Sbjct: 337 gagcagcattggtacatgaactca 360
Score = 83.8 bits (42), Expect = 4e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 1628 tcatcatcctcattgttacatgtgctgagatcacaatagttctctgctacttccagctat 1687
||||||| ||||||||||| ||||||| |||||||||| |||| |||||||||||||| |
Sbjct: 358 tcatcatactcattgttacttgtgctgcgatcacaatacttctttgctacttccagctgt 417
Query: 1688 gtagtg 1693
||||||
Sbjct: 418 gtagtg 423
>gnl|LJGI|TC66728 similar to UniRef100_A7PFR7 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 1205
Score = 200 bits (101), Expect = 2e-50
Identities = 136/147 (92%), Gaps = 3/147 (2%)
Strand = Plus / Plus
Query: 1360 cttgttttcttatggtttggcatctcagttccacttgtgtttgttggtggtcacattggt 1419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 682 cttgttttcttatggtttggcatctcagttccacttgtgtttgttggtggtcacattgat 741
Query: 1420 ttt---aagaaaaaagtgatcgaggatcctgtgaagacaagcaagatccccaggcagata 1476
||| || ||||| |||||| |||||| |||| |||||||||| |||||| ||||||||
Sbjct: 742 tttacaaaaaaaaaggtgatctaggatcttgtggagacaagcaaaatcccctggcagata 801
Query: 1477 ccagagcagccttggtacatgaactca 1503
|||||||||||||||||||||||||||
Sbjct: 802 ccagagcagccttggtacatgaactca 828
Score = 99.6 bits (50), Expect = 6e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1628 tcatcatcctcattgttacatgtgctgagatcacaatagttctctgctacttccagctat 1687
||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| |
Sbjct: 826 tcatcatactcattgttacttgtgctgcgatcacaatagttctctgctacttccagctgt 885
Query: 1688 gtagtg 1693
||||||
Sbjct: 886 gtagtg 891
>gnl|LJGI|BP043644 similar to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (5%)
Length = 500
Score = 196 bits (99), Expect = 4e-49
Identities = 102/103 (99%)
Strand = Plus / Minus
Query: 1833 gctgcttctttcatatggtttctttgtggtgactggtacaattggtttctatgcatgctt 1892
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 500 gctgcttctttcatatggtttctttgtggtgactggtaccattggtttctatgcatgctt 441
Query: 1893 cttgttcacaaggctgatctattcttctgtaaaagttgactga 1935
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cttgttcacaaggctgatctattcttctgtaaaagttgactga 398
>gnl|LJGI|BP074651 similar to UniRef100_A7PS47 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 487
Score = 95.6 bits (48), Expect = 1e-18
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 1360 cttgttttcttatggtttggcatctcagttccacttgtgtttgttggtggtc 1411
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cttgttttcttatcgtttggcatctcagttccacttgtgtttgttggtggtc 116
>gnl|LJGI|FS324322 similar to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 706
Score = 73.8 bits (37), Expect = 4e-12
Identities = 160/201 (79%)
Strand = Plus / Plus
Query: 235 agtgctgagaatcttggcgaagttcttcggggcgaccgcattgaaaactctccttacacg 294
|||||||| |||||||| ||||| ||||| || |||||||||||||| |||| ||| |
Sbjct: 340 agtgctgaaaatcttggggaagtgcttcgtggggaccgcattgaaaattctcgttatgtg 399
Query: 295 ttcaaaatgagggagccacagatgtgcaatgttgtttgtcgtctaactcttaatgcaaca 354
|| |||||| | |||||| | ||||||||| |||| ||| | | ||| |||| | |
Sbjct: 400 tttaaaatgcgcgagccagaaatgtgcaatattgtgtgtaagattaagcttgatgctaaa 459
Query: 355 acagccaaagagttcaaggaaaagatagatgatgaatatcgggtgaacatgattttagac 414
|| || |||| |||||| || ||||| ||||||| ||||||||||||||||| ||||
Sbjct: 460 actgcaaaagcgttcaaagagaagatcaatgatgagtatcgggtgaacatgatcctagat 519
Query: 415 aatcttcctttggttgttccc 435
|| |||||| | |||||||||
Sbjct: 520 aaccttcctctagttgttccc 540
>gnl|LJGI|TC63961 homologue to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (31%)
Length = 980
Score = 58.0 bits (29), Expect = 2e-07
Identities = 128/161 (79%)
Strand = Plus / Plus
Query: 1468 aggcagataccagagcagccttggtacatgaactcagtattctccattctaattggaggc 1527
|||||| |||| |||||| | |||||||||| | || ||||| ||||| ||||| |||
Sbjct: 128 aggcaggtacctgagcaggcatggtacatgacacccgtcttctctattcttattggtggc 187
Query: 1528 atacttcccttcggcgccgtcttcatcgagcttttcttcatcctcacgtctatctggtta 1587
|| ||||| || || || || ||||||||||| ||||| ||||| || || || ||| ||
Sbjct: 188 attcttccatttggtgcagtgttcatcgagctcttctttatcctgacatcaatatggcta 247
Query: 1588 catcagttttattacatatttgggttcctgttcattgtgtt 1628
| ||||| || ||||| ||||| ||||| ||||| |||||
Sbjct: 248 aaccagttctactacatctttggcttccttttcatagtgtt 288