Miyakogusa Predicted Gene
- Lj6g3v1077810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1077810.1 Non Chatacterized Hit- tr|H9MAB2|H9MAB2_PINLA
Uncharacterized protein (Fragment) OS=Pinus
lambertian,40.87,1e-16,APO,APO domain; seg,NULL; coiled-coil,NULL;
UNCHARACTERIZED,NULL; EUKARYOTIC TRANSLATION INITIATION ,CUFF.58949.1
(1332 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68125 similar to UniRef100_A7PFR1 Cluster: Chromosome... 1322 0.0
gnl|LJGI|TC59809 similar to UniRef100_A7PFR1 Cluster: Chromosome... 1203 0.0
gnl|LJGI|BW599969 similar to UniRef100_A7PFR1 Cluster: Chromosom... 430 e-119
>gnl|LJGI|TC68125 similar to UniRef100_A7PFR1 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 860
Score = 1322 bits (667), Expect = 0.0
Identities = 667/667 (100%)
Strand = Plus / Plus
Query: 666 tactcatgaagagcgattctccatccctcgaattccagctgtggttgagctctgcattca 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 tactcatgaagagcgattctccatccctcgaattccagctgtggttgagctctgcattca 67
Query: 726 agctggtgttgaaattccagagtatcccacaaaaaggagaagaaaacctataatccgtat 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 agctggtgttgaaattccagagtatcccacaaaaaggagaagaaaacctataatccgtat 127
Query: 786 cgggaggaaggaatacgttgatgctgatgaaagtgaattaccggatcaaatgccagagaa 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 cgggaggaaggaatacgttgatgctgatgaaagtgaattaccggatcaaatgccagagaa 187
Query: 846 ccctccaaaactattactaactgaaatacctgattcagaaatagtagctccagtggacaa 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ccctccaaaactattactaactgaaatacctgattcagaaatagtagctccagtggacaa 247
Query: 906 ggaggaaatagtccagcttgctgaggaaacacttcaagcatgggaacggatgaggaaagg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggaggaaatagtccagcttgctgaggaaacacttcaagcatgggaacggatgaggaaagg 307
Query: 966 tgccaagagactaatggggatgtaccgcgtgagagtctgcggatattgccctgaaattca 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tgccaagagactaatggggatgtaccgcgtgagagtctgcggatattgccctgaaattca 367
Query: 1026 tgttggtccgcaggggcacaaagctcagaactgtggagctcataaacaccaacaacgcaa 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgttggtccgcaggggcacaaagctcagaactgtggagctcataaacaccaacaacgcaa 427
Query: 1086 tgggcagcatggttggcagtcttcagtgctcaatgacttgatcccgccaaggtttgtgtg 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgggcagcatggttggcagtcttcagtgctcaatgacttgatcccgccaaggtttgtgtg 487
Query: 1146 gcatgttcctgatgtaaacggaccacctctgcaacgagagctgagggagttttatgggca 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gcatgttcctgatgtaaacggaccacctctgcaacgagagctgagggagttttatgggca 547
Query: 1206 ggctcctgctgttgtggaaatgtgcattcaggctggtgctgcattaccagaacagtataa 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ggctcctgctgttgtggaaatgtgcattcaggctggtgctgcattaccagaacagtataa 607
Query: 1266 atcgaccatgcggctggatgttgggatcccatcaactatgcaagaagctgaaatggtggt 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atcgaccatgcggctggatgttgggatcccatcaactatgcaagaagctgaaatggtggt 667
Query: 1326 ttgagat 1332
|||||||
Sbjct: 668 ttgagat 674
>gnl|LJGI|TC59809 similar to UniRef100_A7PFR1 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 786
Score = 1203 bits (607), Expect = 0.0
Identities = 607/607 (100%)
Strand = Plus / Plus
Query: 1 atgcttctcagcaattccattccagggatgactgtgattatgtccattcctaatactaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgcttctcagcaattccattccagggatgactgtgattatgtccattcctaatactaac 239
Query: 61 ggaattgcaactccaaggtgttctctttcactgaagcccaacctatcatcatctcttagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggaattgcaactccaaggtgttctctttcactgaagcccaacctatcatcatctcttagt 299
Query: 121 tctcttcattctttccagtatggtagcagtaagattggagttcctgtgaatattagaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tctcttcattctttccagtatggtagcagtaagattggagttcctgtgaatattagaatt 359
Query: 181 gggccagtgcaggttcgtcaacatgcattaaccattagaaatgaagtgccacaaaatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gggccagtgcaggttcgtcaacatgcattaaccattagaaatgaagtgccacaaaatgct 419
Query: 241 gattttcctcggcggtattcgaaaaaggaaaagaagccttttccagtacccataatagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gattttcctcggcggtattcgaaaaaggaaaagaagccttttccagtacccataatagaa 479
Query: 301 ctgcgaagagcagctagggagaggcttaagaagaagatgaaaaatgagccgcaaaaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctgcgaagagcagctagggagaggcttaagaagaagatgaaaaatgagccgcaaaaacca 539
Query: 361 ttgtctttgtctgcaccaaagaatggattgctggtgaagaaactcataccaactgcttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttgtctttgtctgcaccaaagaatggattgctggtgaagaaactcataccaactgcttat 599
Query: 421 aaagtgtataattcgagaatcactttgattaacaatctgaagaagctgctcaaagtagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aaagtgtataattcgagaatcactttgattaacaatctgaagaagctgctcaaagtagtc 659
Query: 481 cctgtacacgcttgtgggtactgcagcgaaattcatgtaggccctgttggacatccgttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cctgtacacgcttgtgggtactgcagcgaaattcatgtaggccctgttggacatccgttc 719
Query: 541 aagtcgtgtagaggcacacaagcgaacatccggaaaggccttcatgaatggacaaatgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aagtcgtgtagaggcacacaagcgaacatccggaaaggccttcatgaatggacaaatgca 779
Query: 601 cattttg 607
|||||||
Sbjct: 780 cattttg 786
>gnl|LJGI|BW599969 similar to UniRef100_A7PFR1 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 490
Score = 430 bits (217), Expect = e-119
Identities = 256/269 (95%)
Strand = Plus / Plus
Query: 1039 gggcacaaagctcagaactgtggagctcataaacaccaacaacgcaatgggcagcatggt 1098
|||||||||||||| |||||||||||||||| || ||||||| |||||||| |
Sbjct: 222 gggcacaaagctcaaaactgtggagctcatacacggggggggcgcaatgcgcagcatgct 281
Query: 1099 tggcagtcttcagtgctcaatgacttgatcccgccaaggtttgtgtggcatgttcctgat 1158
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tggcagtcttcagtgctaaatgacttgatcccgccaaggtttgtgtggcatgttcctgat 341
Query: 1159 gtaaacggaccacctctgcaacgagagctgagggagttttatgggcaggctcctgctgtt 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtaaacggaccacctctgcaacgagagctgagggagttttatgggcaggctcctgctgtt 401
Query: 1219 gtggaaatgtgcattcaggctggtgctgcattaccagaacagtataaatcgaccatgcgg 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtggaaatgtgcattcaggctggtgctgcattaccagaacagtataaatcgaccatgcgg 461
Query: 1279 ctggatgttgggatcccatcaactatgca 1307
|||||||||||||||||||||||||||||
Sbjct: 462 ctggatgttgggatcccatcaactatgca 490