Miyakogusa Predicted Gene
- Lj6g3v1077660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1077660.1 Non Chatacterized Hit- tr|I1KDE5|I1KDE5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.8,0,seg,NULL; no
description,Signal recognition particle, SRP54 subunit, helical
bundle; no description,,CUFF.58953.1
(1758 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69842 homologue to UniRef100_A7PFQ9 Cluster: Chromoso... 1332 0.0
gnl|LJGI|GO033138 similar to UniRef100_A7PFQ9 Cluster: Chromosom... 1203 0.0
gnl|LJGI|TC71730 homologue to UniRef100_A7PFQ9 Cluster: Chromoso... 884 0.0
gnl|LJGI|GO031054 homologue to UniRef100_A7PFQ9 Cluster: Chromos... 396 e-109
gnl|LJGI|GO019655 UniRef100_A9XVY9 Cluster: Photosystem II CP47 ... 377 e-103
>gnl|LJGI|TC69842 homologue to UniRef100_A7PFQ9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 981
Score = 1332 bits (672), Expect = 0.0
Identities = 672/672 (100%)
Strand = Plus / Plus
Query: 1087 ctctgtgaatcagtggcagcaagtcttgaaggaaaaaagctagcttcatttacaaggata 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctctgtgaatcagtggcagcaagtcttgaaggaaaaaagctagcttcatttacaaggata 61
Query: 1147 tcttcaacagtgcaagctgcaatggaagacgcacttgttcgaattttaactcctagacgc 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tcttcaacagtgcaagctgcaatggaagacgcacttgttcgaattttaactcctagacgc 121
Query: 1207 tctattgatatactaagagatgtgcatgctgccagggagcaaaggaaaccatacgtcgtt 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tctattgatatactaagagatgtgcatgctgccagggagcaaaggaaaccatacgtcgtt 181
Query: 1267 gtatttgttggtgttaatggtgttggaaaatcaactaatctagctaaggttgcttactgg 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtatttgttggtgttaatggtgttggaaaatcaactaatctagctaaggttgcttactgg 241
Query: 1327 cttctacagcacaatgttagtgttatgatggctgcttgtgacacatttcgatcaggggct 1386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cttctacagcacaatgttagtgttatgatggctgcttgtgacacatttcgatcaggggct 301
Query: 1387 gttgagcagctccggacccatgctcggagacttcagatccccatatttgagaagggctat 1446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gttgagcagctccggacccatgctcggagacttcagatccccatatttgagaagggctat 361
Query: 1447 gagaaagatcctgccatcgtggcaaaagaagcaattcaggaagcttcacgcaatggttca 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gagaaagatcctgccatcgtggcaaaagaagcaattcaggaagcttcacgcaatggttca 421
Query: 1507 gatgtggttctagttgacactgctggtcgtatgcaggataatgaaccactgatgagagca 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gatgtggttctagttgacactgctggtcgtatgcaggataatgaaccactgatgagagca 481
Query: 1567 ctgtcaaaactcatctacctcaacaacccagatctagtcttatttgttggagaagcactg 1626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgtcaaaactcatctacctcaacaacccagatctagtcttatttgttggagaagcactg 541
Query: 1627 gttggtaatgatgcagttgatcagctttcgaagttcaatcagaaacttgcggacctcgca 1686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gttggtaatgatgcagttgatcagctttcgaagttcaatcagaaacttgcggacctcgca 601
Query: 1687 acatctcctaatccaagattgatagatgggatcttgctcacaaagtttgacaccattgat 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 acatctcctaatccaagattgatagatgggatcttgctcacaaagtttgacaccattgat 661
Query: 1747 gataaggtggga 1758
||||||||||||
Sbjct: 662 gataaggtggga 673
>gnl|LJGI|GO033138 similar to UniRef100_A7PFQ9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 659
Score = 1203 bits (607), Expect = 0.0
Identities = 616/619 (99%)
Strand = Plus / Plus
Query: 1 atgttagagcagttactgatattcaccagaggaggtttaatcctctggacatgtaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 atgttagagcagttactgatattcaccagaggaggtttaatcctctggacatgtaaagaa 100
Query: 61 cttgggaatgctctgaaaggttcacctattgataccttgatccgttcctgtcttttggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 cttgggaatgctctgaaaggttcacctattgataccttgatccgttcctgtcttttggag 160
Query: 121 gagcgatccggtgccgcgtcgtttaactatgatgcccctggtgcttcctacactctcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gagcgatccggtgccgcgtcgtttaactatgatgcccctggtgcttcctacactctcaaa 220
Query: 181 tggaccttccacaatgagcttggccttgtgtttgtggctgtgtatcaaaagattcttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tggaccttccacaatgagcttggccttgtgtttgtggctgtgtatcaaaagattcttcat 280
Query: 241 ttgttgtatgtggaggatctgcttgctatggtgaagcgcgagttttcgcaggtttatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttgttgtatgtggaggatctgcttgctatggtgaagcgcgagttttcgcaggtttatgat 340
Query: 301 ccgacgaggactgcttatgatggatttgatgagacttttaggcagttgaagatggaggcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ccgacgaggactgcttatgatggatttgatgagacttttaggcagttgaagatggaggcc 400
Query: 361 ctggctcgcgctgaggatttgaagaagtcgaatccggtggtggggaatgtgaagaagcaa 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctggctcgcgctggggatttgaagaagtcgaatccggtggtggggaatgtgaagaagcaa 460
Query: 421 ggagggcaggggaataagaatgggtttgaaggagggaataagaagaagagcgatggttct 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 461 ggagggcaggggaataagaatgggtttgaaggagggaataagtagaagagcgatggttct 520
Query: 481 gtgaagaatgatggtggcgcggatggtgagaatgggaaaggtcgtaaattggagaacggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 521 gtgaagaatgatggtggcgcggatggtgagaatgggaaaggtcgtaaattggagagcggg 580
Query: 541 cactccaatggaaattttgttgcttctaaagatactaacatgaatagtgttaatgtgaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 cactccaatggaaattttgttgcttctaaagatactaacatgaatagtgttaatgtgaat 640
Query: 601 ggtagagagaatacgagct 619
|||||||||||||||||||
Sbjct: 641 ggtagagagaatacgagct 659
>gnl|LJGI|TC71730 homologue to UniRef100_A7PFQ9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1162
Score = 884 bits (446), Expect = 0.0
Identities = 662/734 (90%)
Strand = Plus / Plus
Query: 1021 ccagctttgaaagctcttaaggatagactcatgaccaagaacgtggctgaggagatagct 1080
||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||||||
Sbjct: 5 ccagctttgaaagctctgaaggataggctcatgactaagaatgtggctgaggaaatagct 64
Query: 1081 gagaaactctgtgaatcagtggcagcaagtcttgaaggaaaaaagctagcttcatttaca 1140
|||||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 65 gagaaactatgtgagtcagtggcagcaagtcttgaaggaaaaaaactggcttcatttaca 124
Query: 1141 aggatatcttcaacagtgcaagctgcaatggaagacgcacttgttcgaattttaactcct 1200
|||||||||||||||||||| || ||||||||||| || |||||||| ||||||||||||
Sbjct: 125 aggatatcttcaacagtgcatgcagcaatggaagaagctcttgttcgtattttaactcct 184
Query: 1201 agacgctctattgatatactaagagatgtgcatgctgccagggagcaaaggaaaccatac 1260
|| || |||||||| || | || || | ||||| |||| ||||| |||||||||||
Sbjct: 185 aggcgttctattgacattttgagggacattcatgcagccaaagagcataggaaaccatat 244
Query: 1261 gtcgttgtatttgttggtgttaatggtgttggaaaatcaactaatctagctaaggttgct 1320
|| |||||||||||||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 245 gttgttgtatttgttggagttaatggagttggaaaatccactaatctagccaaggttgct 304
Query: 1321 tactggcttctacagcacaatgttagtgttatgatggctgcttgtgacacatttcgatca 1380
|||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 305 tactggcttcaacaacacaatgttagtgtcatgatggctgcttgtgatacatttcgatca 364
Query: 1381 ggggctgttgagcagctccggacccatgctcggagacttcagatccccatatttgagaag 1440
|| |||||||||||||| ||||| ||||| || |||||||||||||| || |||||||||
Sbjct: 365 ggagctgttgagcagctacggacacatgcacgaagacttcagatccctatctttgagaag 424
Query: 1441 ggctatgagaaagatcctgccatcgtggcaaaagaagcaattcaggaagcttcacgcaat 1500
|||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 425 ggctatgaaaaggatcctgcgcttgtggcaaaagaagcaattcaggaagcttcacgcaat 484
Query: 1501 ggttcagatgtggttctagttgacactgctggtcgtatgcaggataatgaaccactgatg 1560
||||||||||| ||||||||||| || ||||||||||||||||||||||||||| |||||
Sbjct: 485 ggttcagatgttgttctagttgatacagctggtcgtatgcaggataatgaaccattgatg 544
Query: 1561 agagcactgtcaaaactcatctacctcaacaacccagatctagtcttatttgttggagaa 1620
|||||||||||||| || ||||| || ||||| || || || ||||||||||||||||||
Sbjct: 545 agagcactgtcaaagctgatctatcttaacaatcctgacctggtcttatttgttggagaa 604
Query: 1621 gcactggttggtaatgatgcagttgatcagctttcgaagttcaatcagaaacttgcggac 1680
||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||
Sbjct: 605 gcactggttggtaatgatgcagttgatcagctttcaaagttcaatcagaaactagccgac 664
Query: 1681 ctcgcaacatctcctaatccaagattgatagatgggatcttgctcacaaagtttgacacc 1740
||| ||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctctcaacatctctcacacccagattgatagatgggatcttgctcacaaagtttgacacc 724
Query: 1741 attgatgataaggt 1754
|| |||||||||||
Sbjct: 725 atagatgataaggt 738
>gnl|LJGI|GO031054 homologue to UniRef100_A7PFQ9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 629
Score = 396 bits (200), Expect = e-109
Identities = 203/204 (99%)
Strand = Plus / Minus
Query: 1555 ctgatgagagcactgtcaaaactcatctacctcaacaacccagatctagtcttatttgtt 1614
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 451 ctgatgagagcactgtcaaaactcatctacctcaacaacccagatccagtcttatttgtt 392
Query: 1615 ggagaagcactggttggtaatgatgcagttgatcagctttcgaagttcaatcagaaactt 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggagaagcactggttggtaatgatgcagttgatcagctttcgaagttcaatcagaaactt 332
Query: 1675 gcggacctcgcaacatctcctaatccaagattgatagatgggatcttgctcacaaagttt 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gcggacctcgcaacatctcctaatccaagattgatagatgggatcttgctcacaaagttt 272
Query: 1735 gacaccattgatgataaggtggga 1758
||||||||||||||||||||||||
Sbjct: 271 gacaccattgatgataaggtggga 248
Score = 353 bits (178), Expect = 2e-96
Identities = 181/182 (99%)
Strand = Plus / Minus
Query: 901 gatgaggaagatgaggatgcggggaaaaacagcaagcctggtactaagagcaagggttgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gatgaggaagatgaggatgcggggaaaaacagcaagcctggtactaagagcaagggttgg 570
Query: 961 ttttcatccatgttccagagtattgctgggaaggcaaatttagagaagtcagacttggaa 1020
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 569 ttttcatccatgttccagagtattgctgggaaggcaaatttagagaagtcggacttggaa 510
Query: 1021 ccagctttgaaagctcttaaggatagactcatgaccaagaacgtggctgaggagatagct 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccagctttgaaagctcttaaggatagactcatgaccaagaacgtggctgaggagatagct 450
Query: 1081 ga 1082
||
Sbjct: 449 ga 448
>gnl|LJGI|GO019655 UniRef100_A9XVY9 Cluster: Photosystem II CP47 chlorophyll
apoprotein; n=1; Staphylea colchica|Rep: Photosystem II
CP47 chlorophyll apoprotein - Staphylea colchica,
partial (16%)
Length = 598
Score = 377 bits (190), Expect = e-103
Identities = 190/190 (100%)
Strand = Plus / Plus
Query: 427 caggggaataagaatgggtttgaaggagggaataagaagaagagcgatggttctgtgaag 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caggggaataagaatgggtttgaaggagggaataagaagaagagcgatggttctgtgaag 468
Query: 487 aatgatggtggcgcggatggtgagaatgggaaaggtcgtaaattggagaacgggcactcc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aatgatggtggcgcggatggtgagaatgggaaaggtcgtaaattggagaacgggcactcc 528
Query: 547 aatggaaattttgttgcttctaaagatactaacatgaatagtgttaatgtgaatggtaga 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aatggaaattttgttgcttctaaagatactaacatgaatagtgttaatgtgaatggtaga 588
Query: 607 gagaatacga 616
||||||||||
Sbjct: 589 gagaatacga 598