Miyakogusa Predicted Gene
- Lj6g3v1077310.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1077310.2 Non Chatacterized Hit- tr|I1JWB5|I1JWB5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45120
PE,73.98,0,EUKARYOTIC INITIATION FACTOR 4F-RELATED,NULL; EUKARYOTIC
TRANSLATION INITIATION FACTOR 4 GAMMA,NULL;,CUFF.59040.2
(1776 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64126 similar to UniRef100_A7PFP5 Cluster: Chromosome... 1106 0.0
gnl|LJGI|TC69216 similar to UniRef100_A7PFP5 Cluster: Chromosome... 852 0.0
gnl|LJGI|TC64104 535 e-151
gnl|LJGI|TC80974 similar to UniRef100_A7PFP5 Cluster: Chromosome... 291 8e-78
gnl|LJGI|AV409928 similar to UniRef100_A7PFP5 Cluster: Chromosom... 244 2e-63
gnl|LJGI|TC58663 similar to UniRef100_A7PFP5 Cluster: Chromosome... 155 1e-36
>gnl|LJGI|TC64126 similar to UniRef100_A7PFP5 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 938
Score = 1106 bits (558), Expect = 0.0
Identities = 561/562 (99%)
Strand = Plus / Plus
Query: 1212 accagtttcagctgtgccctctgtgaagccgcaggctccagctgtgaaactgaatcatga 1271
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 accagtttcagctgtgccctctgtgaagccgcaggctccggctgtgaaactgaatcatga 60
Query: 1272 agatcttaatcgcagaaccgtctctcttctggaagagtacttcagtgttaggattttgga 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatcttaatcgcagaaccgtctctcttctggaagagtacttcagtgttaggattttgga 120
Query: 1332 agaggcatcactgtgtgtgggggagttaaaatctccatcttaccaccctgaggttgttaa 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaggcatcactgtgtgtgggggagttaaaatctccatcttaccaccctgaggttgttaa 180
Query: 1392 gacagccatttcccttgcacttgataaaagtccaccatgtgttgacccggttgccaatct 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacagccatttcccttgcacttgataaaagtccaccatgtgttgacccggttgccaatct 240
Query: 1452 tctcgagtatctattcatcaagaagatacttacaaatggagacatagggagtggctgttt 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctcgagtatctattcatcaagaagatacttacaaatggagacatagggagtggctgttt 300
Query: 1512 gtcatttggttctcagctggatgacattggcatagatttacccaaagcaccgagtaattt 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcatttggttctcagctggatgacattggcatagatttacccaaagcaccgagtaattt 360
Query: 1572 tggtgagatcatagggaaagtaattttggctggggggttggattttaaggtggtgaaaga 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggtgagatcatagggaaagtaattttggctggggggttggattttaaggtggtgaaaga 420
Query: 1632 gattcttcagaagatggatgatgacctgttccagagagcagtgtttgacagtgcagttgg 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gattcttcagaagatggatgatgacctgttccagagagcagtgtttgacagtgcagttgg 480
Query: 1692 ggtcattagttctgcatctgggcaagctgtattggagtctcaaaaatctgatattgaggc 1751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtcattagttctgcatctgggcaagctgtattggagtctcaaaaatctgatattgaggc 540
Query: 1752 ctgccagagtctgctcaagtaa 1773
||||||||||||||||||||||
Sbjct: 541 ctgccagagtctgctcaagtaa 562
>gnl|LJGI|TC69216 similar to UniRef100_A7PFP5 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 823
Score = 852 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 1347 tgtgggggagttaaaatctccatcttaccaccctgaggttgttaagacagccatttccct 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgggggagttaaaatctccatcttaccaccctgaggttgttaagacagccatttccct 60
Query: 1407 tgcacttgataaaagtccaccatgtgttgacccggttgccaatcttctcgagtatctatt 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcacttgataaaagtccaccatgtgttgacccggttgccaatcttctcgagtatctatt 120
Query: 1467 catcaagaagatacttacaaatggagacatagggagtggctgtttgtcatttggttctca 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catcaagaagatacttacaaatggagacatagggagtggctgtttgtcatttggttctca 180
Query: 1527 gctggatgacattggcatagatttacccaaagcaccgagtaattttggtgagatcatagg 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctggatgacattggcatagatttacccaaagcaccgagtaattttggtgagatcatagg 240
Query: 1587 gaaagtaattttggctggggggttggattttaaggtggtgaaagagattcttcagaagat 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaagtaattttggctggggggttggattttaaggtggtgaaagagattcttcagaagat 300
Query: 1647 ggatgatgacctgttccagagagcagtgtttgacagtgcagttggggtcattagttctgc 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggatgatgacctgttccagagagcagtgtttgacagtgcagttggggtcattagttctgc 360
Query: 1707 atctgggcaagctgtattggagtctcaaaaatctgatattgaggcctgccagagtctgct 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atctgggcaagctgtattggagtctcaaaaatctgatattgaggcctgccagagtctgct 420
Query: 1767 caagtaattc 1776
||||||||||
Sbjct: 421 caagtaattc 430
>gnl|LJGI|TC64104
Length = 708
Score = 535 bits (270), Expect = e-151
Identities = 270/270 (100%)
Strand = Plus / Plus
Query: 1 atggagctagaagaaaaaaccatcaagctgcaaataatactaaataggttgactcctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atggagctagaagaaaaaaccatcaagctgcaaataatactaaataggttgactcctaaa 498
Query: 61 aagtttgatctcttgaaggaccagttaattgattctggcattattacatcagctgacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagtttgatctcttgaaggaccagttaattgattctggcattattacatcagctgacacc 558
Query: 121 ttgatggctgtcgttttgcttatctttgaaaaggctgttttagaaccaaaattttgcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttgatggctgtcgttttgcttatctttgaaaaggctgttttagaaccaaaattttgcccc 618
Query: 181 atgtatgctcagctgtgttctcatcttaaagaaaagcttccttcattcccggaatctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atgtatgctcagctgtgttctcatcttaaagaaaagcttccttcattcccggaatctgaa 678
Query: 241 gaacctggtggaaaagaaatcacttttaag 270
||||||||||||||||||||||||||||||
Sbjct: 679 gaacctggtggaaaagaaatcacttttaag 708
>gnl|LJGI|TC80974 similar to UniRef100_A7PFP5 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1679
Score = 291 bits (147), Expect = 8e-78
Identities = 559/694 (80%), Gaps = 13/694 (1%)
Strand = Plus / Plus
Query: 1084 cctcaaggtagtagtggtattataagtggaag---tagtgcaatagtacatggaggtggt 1140
|||||||||||| |||| |||||||||| || |||||| |||| ||||||||||||
Sbjct: 592 cctcaaggtagtggtggacttataagtgggagaaatagtgccctagtgcatggaggtggt 651
Query: 1141 ccccttactgctcgcctgtcaaactttggtttaggttctgaggctgcacctgaagtctct 1200
| | | ||||||| | |||||| |||||||| || ||||| |||||| |||| || ||
Sbjct: 652 gctccttctgctcgtccatcaaacattggtttaagtgctgagcctgcac-tgaaatccct 710
Query: 1201 tcacctgttaaaccagtttcagctgtgccctctgtgaagccgcaggctccagctgtgaaa 1260
||||||||||||||| || | || || |||||| || ||||||||||||| |||
Sbjct: 711 tcacctgttaaaccaattcctgccgtaccctct------ccacaggctccagctgcaaaa 764
Query: 1261 ctgaatcatgaagatcttaatcgcagaaccgtctctcttctggaagagtacttcagtgtt 1320
||||| || |||||| | |||| ||| || ||||||||||| || || || ||||||
Sbjct: 765 ttgaatactgctgatcttcaccgcaaaactgtttctcttctggaggaatattttagtgtt 824
Query: 1321 aggattttggaagaggcatcactgtgtgtgggggagttaaaatctccatcttaccaccct 1380
|||||||||| ||||||| || ||||||| ||| | || ||||| |||| |||| |
Sbjct: 825 cggattttggatgaggcattacaatgtgtggaggaacttaaggctccagcttatcaccat 884
Query: 1381 gaggttgttaagacagccatttcccttgcacttgataaaagtccaccatgtgttgacccg 1440
|||||||| ||| ||||||| |||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 885 gaggttgtcaaggaagccattgcccttgcactagataaaagtccgccatgcgttgaaccg 944
Query: 1441 gttgccaatcttctcgagtatctattcatcaagaagatacttacaaatggagacataggg 1500
|||||||| ||||| ||| |||| || | |||||||| ||| || | | |||||||||
Sbjct: 945 gttgccaaacttctggagcatctgtttaagaagaagattctttcagctagcgacataggg 1004
Query: 1501 agtggctgtttgtcatttggttctcagctggatgacattggcatagatttacccaaagca 1560
| ||| |||||||| ||||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 1005 actggatgtttgtcgtttggttctacgctagatgatattggcatagatttacccaaagca 1064
Query: 1561 ccgagtaattttggtgagatcatagggaaagtaattttggctggggggttggattttaag 1620
|| ||||||||||||||||| ||||| ||| |||||||||||||||| |||||||| |||
Sbjct: 1065 ccaagtaattttggtgagataataggaaaactaattttggctgggggtttggatttcaag 1124
Query: 1621 gtggtgaaagagattcttcagaagatggatgatgacctgttccagagagcagtgtttgac 1680
||||||| || || ||| ||||| | || |||||| |||||||| ||| | ||||||
Sbjct: 1125 gtggtgagtgaaatccttaagaaggttgaggatgactggttccagaaagcgttttttgac 1184
Query: 1681 agtgcagttggggtcatta---gttctgcatctgggcaagctgtattggagtctcaaaaa 1737
|||| | ||| |||| ||||||||||||||||||||| |||| || ||| |
Sbjct: 1185 tctgcattgcaggtaattacatcttctgcatctgggcaagctgtgctggattcccaagca 1244
Query: 1738 tctgatattgaggcctgccagagtctgctcaagt 1771
|||||| |||| ||||||| |||| |||||||||
Sbjct: 1245 tctgatgttgaagcctgccggagtgtgctcaagt 1278
Score = 79.8 bits (40), Expect = 5e-14
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 518 ttgaggaaaatgttgaagcagtatgtctgtttctcaatactattggcaagcagtttgatg 577
||||||||||||||||||| |||||| |||| |||| |||||||| |||||| ||||||
Sbjct: 44 ttgaggaaaatgttgaagctatatgtcagtttttcaacactattggtaagcagcttgatg 103
Query: 578 aaagtcctacatcgcggcgaatatgtgatgtatattttaaccgattgaaaga 629
|||| || | ||| |||| ||| |||||| || |||| ||||||||||||
Sbjct: 104 aaagcccaaaatcacggcacataaatgatgtgtactttatccgattgaaaga 155
Score = 69.9 bits (35), Expect = 5e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 745 gagatgaaagctaaaaccattactgaaattcgttcagaggcagaaaa 791
||||| ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 250 gagattaaagccaaaaccattactgaaattcattcagaggcagaaaa 296
Score = 58.0 bits (29), Expect = 2e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 907 atgcctggaatgccagggaccaggaaaatgcctgggagtcctgtaattgatattggcaac 966
|||||||| ||||||||||| ||||| |||||||||| |||| |||||||| || ||||
Sbjct: 415 atgcctgggatgccagggacaaggaagatgcctgggatgcctggaattgataatgacaac 474
Query: 967 t 967
|
Sbjct: 475 t 475
>gnl|LJGI|AV409928 similar to UniRef100_A7PFP5 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 414
Score = 244 bits (123), Expect = 2e-63
Identities = 264/311 (84%)
Strand = Plus / Plus
Query: 319 ctgagggaggaagtaaaacagatgactgctcctgagcaggagatggagcgtacagacaag 378
|||||||| ||| ||| |||||||| |||||||||||||||||||||||| ||||||
Sbjct: 26 ctgagggaagaattaaggcagatgacagctcctgagcaggagatggagcgtcgtgacaag 85
Query: 379 gaaagactgatcaagcttcgtacccttggaaatatacgtttaattggtgagctttggaag 438
|||||||| ||||||||||||| |||||||| || ||||||||||||||||| | ||||
Sbjct: 86 gaaagacttctcaagcttcgtacgcttggaaacattcgtttaattggtgagctgttgaag 145
Query: 439 cagaggatggttcctgaaaagattgttcatcacattgttcaggagcttttaggtccctca 498
|| | |||||||||||||||||||| |||||||||||||||||| | ||||| ||||
Sbjct: 146 caaaaaatggttcctgaaaagattgtccatcacattgttcaggagttattaggaacctct 205
Query: 499 gacagcaattcttgtccagttgaggaaaatgttgaagcagtatgtctgtttctcaatact 558
|||||||| ||||||| |||||||||||||||||| |||||| |||| |||| |||
Sbjct: 206 gacagcaaggagtgtccagctgaggaaaatgttgaagctatatgtcagtttttcaacact 265
Query: 559 attggcaagcagtttgatgaaagtcctacatcgcggcgaatatgtgatgtatattttaac 618
||||| |||||| |||||||||| || | ||| |||| ||| |||||| || |||| |
Sbjct: 266 attggtaagcagcttgatgaaagcccaaaatcacggcatataaatgatgtgtactttatc 325
Query: 619 cgattgaaaga 629
|||||||||||
Sbjct: 326 cgattgaaaga 336
>gnl|LJGI|TC58663 similar to UniRef100_A7PFP5 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 1131
Score = 155 bits (78), Expect = 1e-36
Identities = 220/266 (82%), Gaps = 6/266 (2%)
Strand = Plus / Plus
Query: 36 aatactaaataggttgactcctaaaaagtttgatctcttgaaggaccagttaattgattc 95
|||||| |||| |||||||||| | || |||||||| |||||| ||||| || |||||
Sbjct: 872 aatactcaataagttgactcctgagaaatttgatcttctgaagggtcagttgatcgattc 931
Query: 96 tggcattattacatcagctgacaccttgatggctgtcgttttgcttatctttgaaaaggc 155
|||||||| |||||||||||| |||| || || ||||||| || |||||||||||
Sbjct: 932 tggcatta---catcagctgacatattgaaggaagtgattttgctcatatttgaaaaggc 988
Query: 156 tgttttagaaccaaaattttgccccatgtatgctcagctgtgttctcatcttaaagaaaa 215
|| || || |||| |||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 989 ggtgttggagccaacattttgtcccatgtatgctcagctgtgtcaagatcttaatgaaaa 1048
Query: 216 gcttccttcattcccggaatctgaagaacctggtggaaaagaaatcacttttaagcgagt 275
||| ||| ||||||| ||||||||| |||||||| |||||||| ||||| |||||| |
Sbjct: 1049 gctgcctccattccc---atctgaagagcctggtgggaaagaaataactttcaagcgatt 1105
Query: 276 acttttgaatatttgccaggaggctt 301
||| |||||||| |||||||||||||
Sbjct: 1106 actcttgaatatctgccaggaggctt 1131