Miyakogusa Predicted Gene
- Lj6g3v1077270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1077270.1 tr|G7LFG6|G7LFG6_MEDTR Cellulose synthase
OS=Medicago truncatula GN=MTR_8g063270 PE=4
SV=1,82.86,0,coiled-coil,NULL; seg,NULL; Cellulose_synt,Cellulose
synthase; no description,Zinc finger, RING/FYVE,CUFF.58944.1
(2973 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS320016 weakly similar to UniRef100_Q2IB41 Cluster: Ce... 1513 0.0
gnl|LJGI|FS346785 similar to UniRef100_A7PFP0 Cluster: Chromosom... 1027 0.0
gnl|LJGI|TC82583 similar to UniRef100_A7PFP0 Cluster: Chromosome... 98 4e-19
gnl|LJGI|TC78160 homologue to UniRef100_Q9SWW6 Cluster: Cellulos... 96 2e-18
gnl|LJGI|FS345328 homologue to UniRef100_Q6J8X2 Cluster: Cellulo... 70 9e-11
gnl|LJGI|TC81605 similar to UniRef100_Q2IB41 Cluster: Cellulose ... 70 9e-11
gnl|LJGI|TC66434 similar to UniRef100_Q6DUJ2 Cluster: CesA2; n=1... 62 2e-08
gnl|LJGI|TC71612 similar to UniRef100_A7P5Q6 Cluster: Chromosome... 54 5e-06
>gnl|LJGI|FS320016 weakly similar to UniRef100_Q2IB41 Cluster: Cellulose synthase 3;
n=1; Eucalyptus grandis|Rep: Cellulose synthase 3 -
Eucalyptus grandis (Flooded gum), partial (20%)
Length = 793
Score = 1513 bits (763), Expect = 0.0
Identities = 763/763 (100%)
Strand = Plus / Plus
Query: 1 atggaggctagtactagactatttgcagggtctcataacagcaatgagcttgtggtgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atggaggctagtactagactatttgcagggtctcataacagcaatgagcttgtggtgatc 90
Query: 61 caaggaaatgatgagcctaagcaagtgaaaaacttagatggacagctttgtgagatatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 caaggaaatgatgagcctaagcaagtgaaaaacttagatggacagctttgtgagatatgt 150
Query: 121 ggtgattctgtgggacttactgtggacggagacttgtttgtagcttgtgaagagtgtggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ggtgattctgtgggacttactgtggacggagacttgtttgtagcttgtgaagagtgtggc 210
Query: 181 ttcccggtatgcaggccgtgctatgagtatgaaagaagggaagggactcaaggttgccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ttcccggtatgcaggccgtgctatgagtatgaaagaagggaagggactcaaggttgccct 270
Query: 241 cagtgccatacaagatacaagcgaatcaaaggaagcccaagagtgtctggagatgaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cagtgccatacaagatacaagcgaatcaaaggaagcccaagagtgtctggagatgaagat 330
Query: 301 gaagatgatgtggatgatattgaacaggaatttaaaatggaagaagaaaagtacaagctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gaagatgatgtggatgatattgaacaggaatttaaaatggaagaagaaaagtacaagctc 390
Query: 361 aagcaagaagagatgctgcaagggaagatgaaacatggagatgatgatgagaatgctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aagcaagaagagatgctgcaagggaagatgaaacatggagatgatgatgagaatgctaaa 450
Query: 421 ccattactggtgaatggggagctgcccatatcttcttacagcattgtagaacctggtggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ccattactggtgaatggggagctgcccatatcttcttacagcattgtagaacctggtggt 510
Query: 481 gaaaaattggatgacaaggagaaaacagatgactggaagttgaatcaaggcaacctatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaaaaattggatgacaaggagaaaacagatgactggaagttgaatcaaggcaacctatgg 570
Query: 541 cctgaaactgctgccccagttgatcctgaaaagaacatgaatgatgaaacaagacagcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cctgaaactgctgccccagttgatcctgaaaagaacatgaatgatgaaacaagacagcca 630
Query: 601 ctctcaaggaaagtagcaataccttcaggcagactcagtccctatagaatgatggtggtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctctcaaggaaagtagcaataccttcaggcagactcagtccctatagaatgatggtggtg 690
Query: 661 actcggctcctccttctactactcttcattcagtatagaatattccacccagtgcccgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 actcggctcctccttctactactcttcattcagtatagaatattccacccagtgcccgat 750
Query: 721 gcaattggactctggttaatttctgtagtatgtgaaatctggc 763
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gcaattggactctggttaatttctgtagtatgtgaaatctggc 793
>gnl|LJGI|FS346785 similar to UniRef100_A7PFP0 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 672
Score = 1027 bits (518), Expect = 0.0
Identities = 518/518 (100%)
Strand = Plus / Minus
Query: 2456 agttgagatggagtggagttagcctagaggagtggtggagaagtcagcaattctgggtca 2515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agttgagatggagtggagttagcctagaggagtggtggagaagtcagcaattctgggtca 613
Query: 2516 ttggcagtgtgtctgcacacctctttgccgttgcacaagcccttatgggaggcctggcta 2575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ttggcagtgtgtctgcacacctctttgccgttgcacaagcccttatgggaggcctggcta 553
Query: 2576 aaaaagtcaacaaaaacttcagtgttgtatccaaggccccggatgatgaagagtttcatg 2635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aaaaagtcaacaaaaacttcagtgttgtatccaaggccccggatgatgaagagtttcatg 493
Query: 2636 aactctacaccataagatggacagcactgctagtacctccaaccacaatcataataatca 2695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aactctacaccataagatggacagcactgctagtacctccaaccacaatcataataatca 433
Query: 2696 acctcattggtgttgtagctggtttcacagatgccataaacagtggtgcacattcttatg 2755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acctcattggtgttgtagctggtttcacagatgccataaacagtggtgcacattcttatg 373
Query: 2756 gagcactgcttgggaagctcttcttttctttatgggttattgctcatctctatcccttcc 2815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gagcactgcttgggaagctcttcttttctttatgggttattgctcatctctatcccttcc 313
Query: 2816 ttaaaggtttgatgggtaggcagaacaggacacctactcttattgtcatatggtctgtgc 2875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ttaaaggtttgatgggtaggcagaacaggacacctactcttattgtcatatggtctgtgc 253
Query: 2876 ttttggcttctatcttctcattggtttgggtaaggcttgacccttttgtgttgaaaacaa 2935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttttggcttctatcttctcattggtttgggtaaggcttgacccttttgtgttgaaaacaa 193
Query: 2936 aggggcctgatgtaaagcaatgtggaatcagttgctga 2973
||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aggggcctgatgtaaagcaatgtggaatcagttgctga 155
>gnl|LJGI|TC82583 similar to UniRef100_A7PFP0 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 969
Score = 97.6 bits (49), Expect = 4e-19
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 751 tgtgaaatctggcttacattgtcatggatagttgatcagcttcccaaatggtttcccatt 810
||||| |||||| || ||||| ||||||| |||||||| ||||||||||||||||||||
Sbjct: 870 tgtgagatctggtttgcattgacatggattcttgatcagtttcccaaatggtttcccatt 929
Query: 811 gaccgcgagacataccttgatcgcctttcaatcaggt 847
|| |||||||| || |||||||| ||||| |||||||
Sbjct: 930 gatcgcgagacctagcttgatcgtctttccatcaggt 966
Score = 87.7 bits (44), Expect = 4e-16
Identities = 233/296 (78%)
Strand = Plus / Plus
Query: 28 gggtctcataacagcaatgagcttgtggtgatccaaggaaatgatgagcctaagcaagtg 87
||||| |||||| ||||||| |||||||| || || || |||| |||| |||| ||
Sbjct: 41 gggtcacataaccgcaatgaacttgtggtcattcatggccatgaagagcacaagcctttg 100
Query: 88 aaaaacttagatggacagctttgtgagatatgtggtgattctgtgggacttactgtggac 147
|| ||||| ||||| || | |||||||| ||||| ||| |||||||| || |||||
Sbjct: 101 aagaacttggatggccaagtgtgtgagatttgtggggatggcgtgggactcacggtggat 160
Query: 148 ggagacttgtttgtagcttgtgaagagtgtggcttcccggtatgcaggccgtgctatgag 207
|||||||||||||| || || | |||||||| || || || |||||||| |||||||||
Sbjct: 161 ggagacttgtttgtggcctgcaatgagtgtggttttccagtgtgcaggccttgctatgag 220
Query: 208 tatgaaagaagggaagggactcaaggttgccctcagtgccatacaagatacaagcgaatc 267
|||||||| || ||||| | || || || |||||| | || ||||||||||| ||
Sbjct: 221 tatgaaaggagagaaggaagccagaactgtccacagtgcaagaccagatacaagcgtctc 280
Query: 268 aaaggaagcccaagagtgtctggagatgaagatgaagatgatgtggatgatattga 323
||||| || ||| ||||| |||||||| |||||||| ||||||||||| |||||
Sbjct: 281 aaagggagtccacgagtggaaggagatgatgatgaagaggatgtggatgacattga 336
>gnl|LJGI|TC78160 homologue to UniRef100_Q9SWW6 Cluster: Cellulose synthase A catalytic
subunit 7 [UDP-forming]; n=1; Arabidopsis thaliana|Rep:
Cellulose synthase A catalytic subunit 7 [UDP-forming] -
Arabidopsis thaliana (Mouse-ear cress), partial (20%)
Length = 944
Score = 95.6 bits (48), Expect = 2e-18
Identities = 180/224 (80%)
Strand = Plus / Plus
Query: 2671 cctccaaccacaatcataataatcaacctcattggtgttgtagctggtttcacagatgcc 2730
||||||||||| ||| |||| ||||| | |||||||||| ||||| || ||||||||
Sbjct: 328 cctccaaccactatcttaatcatcaatattgttggtgttgttgctggagtctcagatgcc 387
Query: 2731 ataaacagtggtgcacattcttatggagcactgcttgggaagctcttcttttctttatgg 2790
||||||| ||| || || | ||| |||| ||||||||||||||||||| || |||
Sbjct: 388 ataaacaatggctaccaatcctggggaccactatttgggaagctcttcttttccttctgg 447
Query: 2791 gttattgctcatctctatcccttccttaaaggtttgatgggtaggcagaacaggacacct 2850
|| |||| ||||||||||| ||||| ||||||||||||||| |||||||| | || ||
Sbjct: 448 gtgattgtccatctctatccattcctcaaaggtttgatgggtcggcagaaccgcacgccg 507
Query: 2851 actcttattgtcatatggtctgtgcttttggcttctatcttctc 2894
|| || | || || ||||| ||||| ||||||||||| |||||
Sbjct: 508 accattgtcgtgatttggtcagtgctattggcttctattttctc 551
Score = 69.9 bits (35), Expect = 9e-11
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 2453 ttgagttgagatggagtggagttagcctagaggagtggtggagaagtcagcaattctggg 2512
||||| ||| |||||||||||| ||| | ||||| |||||||||| | |||| |||||||
Sbjct: 113 ttgagctgaaatggagtggagtgagcattgaggaatggtggagaaatgagcagttctggg 172
Query: 2513 tcattggcagtgtgtctgcacacctctttgc 2543
||||||| |||| || ||||| ||||||||
Sbjct: 173 tcattggtggtgtatcagcacatctctttgc 203
>gnl|LJGI|FS345328 homologue to UniRef100_Q6J8X2 Cluster: Cellulose synthase; n=1;
Populus tremula x Populus tremuloides|Rep: Cellulose
synthase - Populus tremula x Populus tremuloides, partial
(22%)
Length = 704
Score = 69.9 bits (35), Expect = 9e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 1184 ctatgaagagagaatatgaagaatttaaggtgaggataaatgc 1226
||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 376 ctatgaagagagaatatgaagaatttaaggtgaagattaatgc 334
>gnl|LJGI|TC81605 similar to UniRef100_Q2IB41 Cluster: Cellulose synthase 3; n=1;
Eucalyptus grandis|Rep: Cellulose synthase 3 - Eucalyptus
grandis (Flooded gum), partial (39%)
Length = 1281
Score = 69.9 bits (35), Expect = 9e-11
Identities = 152/191 (79%)
Strand = Plus / Plus
Query: 1970 tgcttaaagaagccattcatgtcttgagttgtagatatgaagatagaactctctggggat 2029
|||||||||||||||||||||| | || ||| |||||||||||| |||| ||||||
Sbjct: 520 tgcttaaagaagccattcatgtaatcagctgtggatatgaagataaaactgaatggggac 579
Query: 2030 atgaggtaggtttgagctatggatctatagcagcagatgttcttacaagtttgaagctgc 2089
|||||| || | || ||||||||||| ||| ||| |||| ||| |||| ||| |||
Sbjct: 580 ttgaggttggctggatttatggatctatcacagaggatattctaacaggtttcaagatgc 639
Query: 2090 attctcgtggctggagatctgtatactgcatgccaaagagagcagcattcagaggcacag 2149
||| || || ||||| || | ||||||||||||| |||||| ||||||| || || |
Sbjct: 640 attgccgggggtggaggtccatttactgcatgccaaggagagctgcattcaagggtactg 699
Query: 2150 ctcctatcaac 2160
|||||||||||
Sbjct: 700 ctcctatcaac 710
Score = 69.9 bits (35), Expect = 9e-11
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 2453 ttgagttgagatggagtggagttagcctagaggagtggtggagaagtcagcaattctggg 2512
||||| ||| |||||||||||| ||| | ||||| |||||||||| | |||| |||||||
Sbjct: 1003 ttgagctgaaatggagtggagtgagcattgaggaatggtggagaaatgagcagttctggg 1062
Query: 2513 tcattggcagtgtgtctgcacacctctttgc 2543
||||||| |||| || ||||| ||||||||
Sbjct: 1063 tcattggtggtgtatcagcacatctctttgc 1093
>gnl|LJGI|TC66434 similar to UniRef100_Q6DUJ2 Cluster: CesA2; n=1; Acacia mangium|Rep:
CesA2 - Acacia mangium, partial (71%)
Length = 2954
Score = 61.9 bits (31), Expect = 2e-08
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 1587 tgtccagtttccactaagatttgacagccttgataggaatgatcgttatgccaacaaaaa 1646
|||||||||||||| || |||||| | |||||| ||||||||| ||||||||| ||
Sbjct: 2084 tgtccagtttccacagaggtttgacggtattgataagaatgatcgatatgccaaccgtaa 2143
Query: 1647 cactgttttatttgatattaacttgag 1673
|||||||| |||||||| ||||||||
Sbjct: 2144 tactgttttctttgatataaacttgag 2170
>gnl|LJGI|TC71612 similar to UniRef100_A7P5Q6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 946
Score = 54.0 bits (27), Expect = 5e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 288 tggagatgaagatgaagatgatgtggatgat 318
|||||||||||||||||||||||| ||||||
Sbjct: 375 tggagatgaagatgaagatgatgttgatgat 405