Miyakogusa Predicted Gene
- Lj6g3v1077240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1077240.1 Non Chatacterized Hit- tr|K3YPB0|K3YPB0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016102,33.45,0.00000000000002,seg,NULL; FAMILY NOT NAMED,NULL;
DUF566,Protein of unknown function DUF566,CUFF.58914.1
(1854 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76976 weakly similar to UniRef100_A7PFN8 Cluster: Chr... 751 0.0
gnl|LJGI|TC68628 UniRef100_A9RRG3 Cluster: Predicted protein; n=... 159 8e-38
>gnl|LJGI|TC76976 weakly similar to UniRef100_A7PFN8 Cluster: Chromosome chr11
scaffold_14, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_14, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 739
Score = 751 bits (379), Expect = 0.0
Identities = 398/403 (98%), Gaps = 1/403 (0%)
Strand = Plus / Plus
Query: 1453 tctgttttgaatgatcaaatggcctaccttgatgaatgggctacgcttgagacagatcat 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgttttgaatgatcaaatggcctaccttgatgaatgggctacgcttgagacagatcat 60
Query: 1513 gttgacgctctatccggtgctgtggaagatttggaggcgagcacccttcgtcttcctgta 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgacgctctatccggtgctgtggaagatttggaggcgagcacccttcgtcttcctgta 120
Query: 1573 actagaggagcaatggtagatattgagcatttgaaggttgctatctgtcaagctgttgat 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actagaggagcaatggtagatattgagcatttgaaggttgctatctgtcaagctgttgat 180
Query: 1633 gtcatgcaagcaatggggtctgcaattcgctctttattctcacaggtggagggcatgaat 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcatgcaagcaatggggtctgcaattcgctctttattctcacaggtggagggcatgaat 240
Query: 1693 gatttaatttctggagttgctgttgtagcaacaaaggaaaaatccatacttgatgaatgt 1752
||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||
Sbjct: 241 gatttaatttctggagttgctgttgtagctaccaaggcaaaatccatacttgatgaatgt 300
Query: 1753 gaaatgctactggcttcagtagctgctttgcaggtagaggaaagtagcctacagacgcat 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaatgctactggcttcagtagctgctttgcaggtagaggaaagtagcctacagacgcat 360
Query: 1813 ctaattcaattcaag-caagttttggggataatcaactagtca 1854
||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 361 ctaattcaattcaagccacgttttggggataatcaactagtca 403
>gnl|LJGI|TC68628 UniRef100_A9RRG3 Cluster: Predicted protein; n=1; Physcomitrella
patens subsp. patens|Rep: Predicted protein -
Physcomitrella patens subsp. patens, partial (13%)
Length = 738
Score = 159 bits (80), Expect = 8e-38
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 atggatgtatgtgaatcacagcaagcatcatcacggaggctaaaagctgtggagactcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atggatgtatgtgaatcacagcaagcatcatcacggaggctaaaagctgtggagactcca 718
Query: 61 agaccacccttggttctggc 80
||||||||||||||||||||
Sbjct: 719 agaccacccttggttctggc 738