Miyakogusa Predicted Gene
- Lj6g3v1065780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1065780.1 Non Chatacterized Hit- tr|D7L4T7|D7L4T7_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,26,3e-18,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like;
F_box_assoc_1: F-box protein intera,CUFF.58888.1
(1542 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO004931 222 5e-57
gnl|LJGI|BP043760 similar to UniRef100_P37938 Cluster: Mating-ty... 147 2e-34
gnl|LJGI|TC69956 similar to UniRef100_A7Z3J5 Cluster: PenP; n=1;... 111 1e-23
gnl|LJGI|TC66866 88 2e-16
gnl|LJGI|TC59897 62 1e-08
>gnl|LJGI|GO004931
Length = 689
Score = 222 bits (112), Expect = 5e-57
Identities = 163/180 (90%)
Strand = Plus / Plus
Query: 133 agggtagcagacaaagttgatgatgagccagaaagtcaacaacttggggcttcttttgct 192
|||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 139 agggtagcagtggaagttgatgatgagccagaaagtcagcaacttggggcttctcttgct 198
Query: 193 gatcttccaacccacattactactgacattctactaagacttcctgttaagtctattctc 252
|||||||||||||| || |||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 199 gatcttccaacccatatcactactgatattctgctaagacttcctgtgaagtctattctc 258
Query: 253 atttgtaaatctgtttgcacaagttggaaagctctaatctcagacccgcattttgcaaaa 312
|||||||||| |||||| | ||||| ||||||| | ||||||||||| ||||||||||||
Sbjct: 259 atttgtaaatgtgtttgtagaagtttgaaagctatgatctcagacccccattttgcaaaa 318
Score = 61.9 bits (31), Expect = 1e-08
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 469 gaatgcaactgtcacctgaagcttgagcgcaaactcaagcttcctcttcatggtgccaaa 528
||||||||||||||| | | ||||||| ||| ||||||||||| ||| ||||||||||
Sbjct: 475 gaatgcaactgtcactttatacttgagcataaagtcaagcttccttttcgtggtgccaaa 534
Query: 529 ctagttt 535
|||||||
Sbjct: 535 ctagttt 541
>gnl|LJGI|BP043760 similar to UniRef100_P37938 Cluster: Mating-type protein A-alpha Z4;
n=1; Schizophyllum commune|Rep: Mating-type protein,
partial (1%)
Length = 506
Score = 147 bits (74), Expect = 2e-34
Identities = 181/217 (83%), Gaps = 6/217 (2%)
Strand = Plus / Minus
Query: 1319 gcttcatctactatgaacctgaaaagaataaattcaaaaaatttaaggttcttgggattg 1378
|||| |||||| |||||||||||||| ||| ||||||| |||||||||| |||||
Sbjct: 423 gctttatctaccatgaacctgaaaagcatagattcaaactttttaaggttcgtggga--- 367
Query: 1379 ggactcaatcaacatttgaggttattcctcatattcacaatctcatctcattgaaggatg 1438
|||||||| |||||||||||||||||||| || |||| ||||||||||||||||||
Sbjct: 366 ---ctcaatcatcatttgaggttattcctcatttttccaatttcatctcattgaaggatg 310
Query: 1439 ctgtgaatagtgacaatatcaaggtgatgaatgtccacgcaaggtctgcagagttaaaat 1498
||||||| | |||||||| ||||| ||||||||||| |||||| ||||||||| ||||
Sbjct: 309 ctgtgaaaggagacaatattgaggtgctgaatgtccactcaaggtgtgcagagttgaaat 250
Query: 1499 tgcgcgaagaaagtgaagtcattttcttggctaaagt 1535
||| ||| ||| |||||| |||| ||| |||||||
Sbjct: 249 tgcatgaacaaaatgaagttctttttttgactaaagt 213
>gnl|LJGI|TC69956 similar to UniRef100_A7Z3J5 Cluster: PenP; n=1; Bacillus
amyloliquefaciens FZB42|Rep: PenP - Bacillus
amyloliquefaciens (strain FZB42), partial (5%)
Length = 1185
Score = 111 bits (56), Expect = 1e-23
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 615 tgtggtgaattcttgtaatggcttgctttgcttgtctgatagggacagtgactatatcgt 674
||||||||||||||||||||||||||||||||||||||||| ||| || ||||| | ||
Sbjct: 178 tgtggtgaattcttgtaatggcttgctttgcttgtctgatatggaaagaaactatcttgt 237
Query: 675 tgtctgtaaccccgttacaggtgagttcattagacttccagaagctac 722
||| || || || |||| ||||||||||||||||||||| ||| ||||
Sbjct: 238 tgtttgcaatccagttataggtgagttcattagacttccggaacctac 285
Score = 75.8 bits (38), Expect = 7e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 473 gcaactgtcacctgaagcttgagcgcaaactcaagcttcctcttcatggtgccaaactag 532
||||||||||| | || ||||||| ||||||||||||| || || ||||| ||||||||
Sbjct: 21 gcaactgtcactttaaacttgagcataaactcaagcttcgtcgtcgtggtggcaaactag 80
Query: 533 ttttggacaaaagagatg 550
|||||||||||||||||
Sbjct: 81 atttggacaaaagagatg 98
Score = 65.9 bits (33), Expect = 7e-10
Identities = 123/153 (80%)
Strand = Plus / Plus
Query: 1386 atcaacatttgaggttattcctcatattcacaatctcatctcattgaaggatgctgtgaa 1445
||||| |||||||| | |||||||| ||| | ||| |||||| | |||| |||||||||
Sbjct: 901 atcaaaatttgaggctgttcctcatgttcctagtcttatctcactaaagggtgctgtgaa 960
Query: 1446 tagtgacaatatcaaggtgatgaatgtccacgcaaggtctgcagagttaaaattgcgcga 1505
| || ||||| ||||||||||||||||| |||||| || |||| | ||||||| ||
Sbjct: 961 aggagataatattgaggtgatgaatgtccactcaaggtgtgaagaggtgaaattgcaaga 1020
Query: 1506 agaaagtgaagtcattttcttggctaaagtgaa 1538
||||| ||||| ||||||||||| ||||||
Sbjct: 1021 agaaaaagaagttcctttcttggctatagtgaa 1053
Score = 56.0 bits (28), Expect = 7e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1150 aaaatgtggattatgaagaaatatggttttggagaatcatggac 1193
||||||||||||||||||||| ||| ||| | ||||||||||||
Sbjct: 695 aaaatgtggattatgaagaaaaatgatttcgaagaatcatggac 738
>gnl|LJGI|TC66866
Length = 1034
Score = 87.7 bits (44), Expect = 2e-16
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 988 tcaatattgtgtttcaactttgaaagcgagaggttccagtccttcccttctcctcc 1043
||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 161 tcaatattgtgtttcgactttgaaagcgagaggttccggtccttccctactcctcc 216
Score = 69.9 bits (35), Expect = 4e-11
Identities = 123/150 (82%), Gaps = 3/150 (2%)
Strand = Plus / Plus
Query: 1152 aatgtggattatgaagaaatatggttttggagaatcatggacaaaggttctcaacattga 1211
|||||||||||||||| |||||||||| |||||| ||||| ||| || ||| | ||||
Sbjct: 313 aatgtggattatgaaggaatatggtttcaaagaatcgtggactaagattttcagctttga 372
Query: 1212 tactataaggacagatcgttggccttatggtc-agtatttt--ccagtaaaatactttaa 1268
|||||| || | |||| ||||||| |||| | ||| || ||||||||| |||||||
Sbjct: 373 tactatgagcagttatcgctggccttttggtggattatattggccagtaaaacactttaa 432
Query: 1269 gaatgatgctgctatattgatgtttcattc 1298
||||| | ||||||||||||||| ||||||
Sbjct: 433 gaatggttctgctatattgatgtatcattc 462
Score = 67.9 bits (34), Expect = 2e-10
Identities = 130/162 (80%)
Strand = Plus / Plus
Query: 1377 tgggactcaatcaacatttgaggttattcctcatattcacaatctcatctcattgaagga 1436
|||||||||||||| |||||| |||||||||||||||| | | | ||||| |||| ||
Sbjct: 523 tgggactcaatcaagatttgatgttattcctcatattcctagttttatctcgctgaaaga 582
Query: 1437 tgctgtgaatagtgacaatatcaaggtgatgaatgtccacgcaaggtctgcagagttaaa 1496
|| |||||| | |||||||| ||||| ||||||| ||| |||||| || ||||| ||
Sbjct: 583 tgttgtgaaaggagacaatattgaggtgctgaatgtgcactcaaggtatgaggagttcaa 642
Query: 1497 attgcgcgaagaaagtgaagtcattttcttggctaaagtgaa 1538
||| ||||||| || || |||||||||||||||||||
Sbjct: 643 atttatggaagaaaatgcagatcttttcttggctaaagtgaa 684
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1078 accatgggagaattaaaaggctctctttacatatgtgattc 1118
|||||||||||||| | |||||||||||||||||||||||
Sbjct: 248 accatgggagaattgaggggctctctttacatatgtgattc 288
>gnl|LJGI|TC59897
Length = 761
Score = 61.9 bits (31), Expect = 1e-08
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1152 aatgtggattatgaagaaatatggttttggagaatcatggacaaaggttctcaacattga 1211
|||||||||||||||| | |||||| ||| |||||||||||| | || | ||| ||||||
Sbjct: 21 aatgtggattatgaaggactatggtgttgaagaatcatggactagggctttcagcattga 80
Query: 1212 tactataaggacagatcgttggccttatggt 1242
|||||| | | | || ||||||||||||||
Sbjct: 81 tactatgataagatattgttggccttatggt 111