Miyakogusa Predicted Gene
- Lj6g3v1065720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1065720.1 Non Chatacterized Hit- tr|B9SNB1|B9SNB1_RICCO
Putative uncharacterized protein OS=Ricinus communis G,23.02,9e-18,no
description,NULL; A Receptor for Ubiquitination Targets,F-box domain,
cyclin-like; seg,NULL; FBOX,CUFF.58869.1
(1530 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043760 similar to UniRef100_P37938 Cluster: Mating-ty... 345 5e-94
gnl|LJGI|TC66866 331 8e-90
gnl|LJGI|GO004931 256 4e-67
gnl|LJGI|TC69956 similar to UniRef100_A7Z3J5 Cluster: PenP; n=1;... 246 3e-64
gnl|LJGI|TC59897 123 3e-27
gnl|LJGI|TC58021 90 5e-17
gnl|LJGI|BP080534 similar to UniRef100_A8DSA0 Cluster: ATP synth... 64 3e-09
gnl|LJGI|TC60244 weakly similar to UniRef100_Q2HS67 Cluster: Cyc... 58 2e-07
>gnl|LJGI|BP043760 similar to UniRef100_P37938 Cluster: Mating-type protein A-alpha Z4;
n=1; Schizophyllum commune|Rep: Mating-type protein,
partial (1%)
Length = 506
Score = 345 bits (174), Expect = 5e-94
Identities = 264/294 (89%)
Strand = Plus / Minus
Query: 1182 tcgctggccttatggtggtttatattggccagtaaaacacttcaaaaatggtgctgctat 1241
||||||||||| ||||||||||| |||||||||| |||| || |||||||||||||||||
Sbjct: 506 tcgctggccttgtggtggtttatgttggccagtacaacaatttaaaaatggtgctgctat 447
Query: 1242 attgatgtatcattccagcaattgctttatatactatgaacctgaaaagtatggattcaa 1301
||||||||||||||| |||||||||||| ||| |||||||||||||| || |||||||
Sbjct: 446 gttgatgtatcattccgacaattgctttatctaccatgaacctgaaaagcatagattcaa 387
Query: 1302 aatttttaaggttcgtgggactcaatatacatttgaggttattcctcatattcccaatct 1361
| |||||||||||||||||||||||| |||||||||||||||||||| || ||||| |
Sbjct: 386 actttttaaggttcgtgggactcaatcatcatttgaggttattcctcatttttccaattt 327
Query: 1362 catctcattgaaggatgctgtgaagggagacaacattgaggtgctgaatatccactcaag 1421
|||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||
Sbjct: 326 catctcattgaaggatgctgtgaaaggagacaatattgaggtgctgaatgtccactcaag 267
Query: 1422 gtgtgcacagtttcaattgcacgaagaaaacgaagttcttttcttggctaaagt 1475
||||||| |||| ||||||| ||| |||| ||||||||||| ||| |||||||
Sbjct: 266 gtgtgcagagttgaaattgcatgaacaaaatgaagttctttttttgactaaagt 213
>gnl|LJGI|TC66866
Length = 1034
Score = 331 bits (167), Expect = 8e-90
Identities = 320/371 (86%)
Strand = Plus / Plus
Query: 1108 atgtggattatgaagaaatatggtttcggtgaatcatggactaaggtttttagcattgat 1167
||||||||||||||| ||||||||||| ||||| ||||||||| |||| ||| |||||
Sbjct: 314 atgtggattatgaaggaatatggtttcaaagaatcgtggactaagattttcagctttgat 373
Query: 1168 actatgagcagagatcgctggccttatggtggtttatattggccagtaaaacacttcaaa 1227
||||||||||| |||||||||||| |||||| ||||||||||||||||||||||| ||
Sbjct: 374 actatgagcagttatcgctggccttttggtggattatattggccagtaaaacactttaag 433
Query: 1228 aatggtgctgctatattgatgtatcattccagcaattgctttatatactatgaacctgaa 1287
|||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||| |
Sbjct: 434 aatggttctgctatattgatgtatcattcctacaatttctttatctactatgaacctgga 493
Query: 1288 aagtatggattcaaaatttttaaggttcgtgggactcaatatacatttgaggttattcct 1347
||| ||||||||||||||||||| |||||||||||||||| | |||||| |||||||||
Sbjct: 494 aaggatggattcaaaatttttaaagttcgtgggactcaatcaagatttgatgttattcct 553
Query: 1348 catattcccaatctcatctcattgaaggatgctgtgaagggagacaacattgaggtgctg 1407
|||||||| | | | ||||| |||| |||| |||||| |||||||| ||||||||||||
Sbjct: 554 catattcctagttttatctcgctgaaagatgttgtgaaaggagacaatattgaggtgctg 613
Query: 1408 aatatccactcaaggtgtgcacagtttcaattgcacgaagaaaacgaagttcttttcttg 1467
||| | |||||||||| || |||| |||| |||||||| | || ||||||||||
Sbjct: 614 aatgtgcactcaaggtatgaggagttcaaatttatggaagaaaatgcagatcttttcttg 673
Query: 1468 gctaaagtgaa 1478
|||||||||||
Sbjct: 674 gctaaagtgaa 684
Score = 65.9 bits (33), Expect = 7e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 887 gatttcctacttgtgtgagtggggcacttcattggat 923
|||||||||||||||| ||||||||||||||||||||
Sbjct: 102 gatttcctacttgtgttagtggggcacttcattggat 138
>gnl|LJGI|GO004931
Length = 689
Score = 256 bits (129), Expect = 4e-67
Identities = 367/443 (82%), Gaps = 5/443 (1%)
Strand = Plus / Plus
Query: 52 agggtagcagagaaagttgataatgagtcaaaaagtcaacaacttggggtttcttttact 111
|||||||||| | |||||||| ||||| || ||||||| |||||||||| |||| || ||
Sbjct: 139 agggtagcagtggaagttgatgatgagccagaaagtcagcaacttggggcttctcttgct 198
Query: 112 gatcttccatcacacatcagtactgacattctgctaagacttcctattaagtctattctc 171
||||||||| | || |||| |||||| |||||||||||||||||| | ||||||||||||
Sbjct: 199 gatcttccaacccatatcactactgatattctgctaagacttcctgtgaagtctattctc 258
Query: 172 atttgtaaatgtgtttgcccaagttggaaagctctgatctcagacccacattttaccaaa 231
||||||||||||||||| ||||| ||||||| ||||||||||||| |||||| | |||
Sbjct: 259 atttgtaaatgtgtttgtagaagtttgaaagctatgatctcagacccccattttgcaaaa 318
Query: 232 ttgcactttcagcatgcctcaaccggtttcatgattcgggccaacgctccgtatctagtg 291
| |||||||||||| || | | |||||||||||||| ||||| | | | | | ||
Sbjct: 319 cttcactttcagcattcccaatctggtttcatgattcgtgccaaggataagaa---attg 375
Query: 292 tcgagaatcctgcaccttctggagtttgagcctgaaaaaattgaaaaagatgatgatgat 351
||| ||||| || ||||||| ||| ||| ||||||| ||||||| ||||||||||||
Sbjct: 376 tcgggaatcgtgtaccttcttgagcgcgagactgaaaagtttgaaaatgatgatgatgat 435
Query: 352 gaccaattctgtttctgtgaggact-tatctatcaaacctgaatgcaactctcacttgaa 410
||||||||||| ||||||| ||| ||| ||| | |||||||||||||| |||||| |
Sbjct: 436 agccaattctgttgctgtgagaactctat-tatgagacctgaatgcaactgtcactttat 494
Query: 411 acttgagaataaactcaagcttcctcttcgtgatgcaaaactagttttggacaaaagaga 470
||||||| ||||| ||||||||||| |||||| ||| |||||||||| || || |||||
Sbjct: 495 acttgagcataaagtcaagcttccttttcgtggtgccaaactagtttggggtaatagaga 554
Query: 471 tgagaccgagaaaaggggcagac 493
||| | | ||||||| |||||||
Sbjct: 555 tgaaagcaagaaaagaggcagac 577
>gnl|LJGI|TC69956 similar to UniRef100_A7Z3J5 Cluster: PenP; n=1; Bacillus
amyloliquefaciens FZB42|Rep: PenP - Bacillus
amyloliquefaciens (strain FZB42), partial (5%)
Length = 1185
Score = 246 bits (124), Expect = 3e-64
Identities = 308/371 (83%), Gaps = 15/371 (4%)
Strand = Plus / Plus
Query: 1108 atgtggattatgaagaaatatggtttcggtgaatcatggactaaggtttttagcattgat 1167
|||||||||||||||||| ||| ||||| |||||||||||| ||||| |||| ||||
Sbjct: 698 atgtggattatgaagaaaaatgatttcgaagaatcatggactcttgttttcagcagtgat 757
Query: 1168 actatgagcagagatcgctggccttatggtggtttatattggccagtaaaacacttcaaa 1227
| ||||||||| |||| ||||| ||||||||||||||||||||||||| |
Sbjct: 758 attatgagcag---------gcctaatggtagtttatattggccagtaaaacactttcag 808
Query: 1228 aatggtgctgctatattgatgtatcattccagcaattgctttatatactatgaacctgaa 1287
|||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 809 aatggtgctgctttattgatgtatcattcttgcaattgctttatctactatgaacctgaa 868
Query: 1288 aagtatggattcaaaatttttaaggttcgtgggactcaatatacatttgaggttattcct 1347
| ||||||||||| | |||||||||||||||| || | |||||||| | |||||
Sbjct: 869 aggtatggattcagattttttaaggttcgtgg------atcaaaatttgaggctgttcct 922
Query: 1348 catattcccaatctcatctcattgaaggatgctgtgaagggagacaacattgaggtgctg 1407
||| |||| | ||| |||||| | |||| ||||||||| ||||| || ||||||||| ||
Sbjct: 923 catgttcctagtcttatctcactaaagggtgctgtgaaaggagataatattgaggtgatg 982
Query: 1408 aatatccactcaaggtgtgcacagtttcaattgcacgaagaaaacgaagttcttttcttg 1467
||| ||||||||||||||| | || | ||||||| |||||||| ||||||| |||||||
Sbjct: 983 aatgtccactcaaggtgtgaagaggtgaaattgcaagaagaaaaagaagttcctttcttg 1042
Query: 1468 gctaaagtgaa 1478
|||| ||||||
Sbjct: 1043 gctatagtgaa 1053
Score = 105 bits (53), Expect = 8e-22
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 395 gcaactctcacttgaaacttgagaataaactcaagcttcctcttcgtgatgcaaaactag 454
|||||| |||||| ||||||||| ||||||||||||||| || ||||| || |||||||
Sbjct: 21 gcaactgtcactttaaacttgagcataaactcaagcttcgtcgtcgtggtggcaaactag 80
Query: 455 ttttggacaaaagagatgagaccgagaaaaggggcagacaa 495
|||||||||||||||||||||| | ||||||||||||||
Sbjct: 81 atttggacaaaagagatgagaccaaacaaaggggcagacaa 121
Score = 83.8 bits (42), Expect = 3e-15
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 534 tgctgtggtgaattcttgtaatggcttgctttgcttgtgtgatccgagcagagacaattt 593
|||||||||||||||||||||||||||||||||||||| |||| | ||| || || |
Sbjct: 175 tgctgtggtgaattcttgtaatggcttgctttgcttgtctgatatggaaagaaactatct 234
Query: 594 tgttgtttgcaacccagtttcgggtgagtttataagacttcc 635
|||||||||||| |||||| |||||||| || ||||||||
Sbjct: 235 tgttgtttgcaatccagttataggtgagttcattagacttcc 276
Score = 75.8 bits (38), Expect = 7e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 691 ggttttggtttgctacccaaaactaatgaatataaggtggtaagaatatt 740
||||||||||| | |||||||||||||||||| |||||||||||||||||
Sbjct: 329 ggttttggtttccaacccaaaactaatgaatacaaggtggtaagaatatt 378
>gnl|LJGI|TC59897
Length = 761
Score = 123 bits (62), Expect = 3e-27
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 1108 atgtggattatgaagaaatatggtttcggtgaatcatggactaaggtttttagcattgat 1167
||||||||||||||| | |||||| | | ||||||||||||| || ||| |||||||||
Sbjct: 22 atgtggattatgaaggactatggtgttgaagaatcatggactagggctttcagcattgat 81
Query: 1168 actatgagcagagatcgctggccttatggtggtttatattggccagtaaaacacttcaaa 1227
||||||| ||| || | |||||||||||||||||||||||||| ||| || | || ||
Sbjct: 82 actatgataagatattgttggccttatggtggtttatattggcctgtacaaaaatttaag 141
Query: 1228 aatggtgctgctatattgatgtatcattccagcaattgctttatatactatgaa 1281
| | ||||||||||||| |||||||||| |||||||||||| |||||||||
Sbjct: 142 agtcctgctgctatattgttgtatcattcatccaattgctttatctactatgaa 195
>gnl|LJGI|TC58021
Length = 805
Score = 89.7 bits (45), Expect = 5e-17
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 515 agccagaagatgataagtttgctgtggtgaattcttgtaatggcttgctttgcttgtgtg 574
|||||||| || |||||||| |||||||||||||||| ||| || |||||||||||||
Sbjct: 603 agccagaaaatagtaagtttgatgtggtgaattcttgtgctggtttcctttgcttgtgtg 662
Query: 575 atccgagcagagacaattttgttgtttgcaacccagtttcgggtgagtttataagacttc 634
||| | || ||| |||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 663 atcgaaacaaagagtattttgttgtttgcaacccaattataggtgagtttatcagacttc 722
Query: 635 c 635
|
Sbjct: 723 c 723
>gnl|LJGI|BP080534 similar to UniRef100_A8DSA0 Cluster: ATP synthase protein 8; n=1;
Ruspolia dubia|Rep: ATP synthase protein 8 - Ruspolia
dubia, partial (34%)
Length = 433
Score = 63.9 bits (32), Expect = 3e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 1430 agtttcaattgcacgaagaaaacgaagttcttttcttggctaaagtgaatggtgaagtgg 1489
||||| |||||| |||||||| |||||||||||||||||||| ||||||| || |||||
Sbjct: 425 agtttaaattgcgtgaagaaaatgaagttcttttcttggctaatgtgaatgctgtagtgg 366
>gnl|LJGI|TC60244 weakly similar to UniRef100_Q2HS67 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago truncatula|Rep:
Cyclin-like F-box; F-box protein interaction domain -
Medicago truncatula (Barrel medic), partial (12%)
Length = 1433
Score = 58.0 bits (29), Expect = 2e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1420 aggtgtgcacagtttcaattgcacgaagaaaacgaagttcttttcttggctaaagtgaat 1479
||||||||| ||||| || |||| |||||||| |||||| |||| ||||||||||||||
Sbjct: 1152 aggtgtgcaaagtttaaagtgcaagaagaaaatgaagttactttcctggctaaagtgaat 1211
Query: 1480 g 1480
|
Sbjct: 1212 g 1212