Miyakogusa Predicted Gene
- Lj6g3v1065690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1065690.1 tr|A9XI05|A9XI05_NICAL Class S F-box protein
OS=Nicotiana alata GN=DD6 PE=2 SV=1,29.9,6e-18,F_box_assoc_1: F-box
protein interaction domain,F-box associated interaction domain;
seg,NULL,gene.g65563.t1.1
(1227 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043760 similar to UniRef100_P37938 Cluster: Mating-ty... 728 0.0
gnl|LJGI|TC66866 293 1e-78
gnl|LJGI|TC69956 similar to UniRef100_A7Z3J5 Cluster: PenP; n=1;... 188 6e-47
gnl|LJGI|TC59897 100 4e-20
gnl|LJGI|TC58021 70 4e-11
>gnl|LJGI|BP043760 similar to UniRef100_P37938 Cluster: Mating-type protein A-alpha Z4;
n=1; Schizophyllum commune|Rep: Mating-type protein,
partial (1%)
Length = 506
Score = 728 bits (367), Expect = 0.0
Identities = 381/388 (98%)
Strand = Plus / Minus
Query: 840 tcgctggccttgtggtggtttatgttggccagtacaacaatttaaaaatggtgctgctat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tcgctggccttgtggtggtttatgttggccagtacaacaatttaaaaatggtgctgctat 447
Query: 900 gttgatgtatcattccgacaattgctttatctaccatgaacctgaaaagcatagattcaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gttgatgtatcattccgacaattgctttatctaccatgaacctgaaaagcatagattcaa 387
Query: 960 actttttaaggttcgtgggactcaatcatcatttgaggttattcctcatttttccaattt 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 actttttaaggttcgtgggactcaatcatcatttgaggttattcctcatttttccaattt 327
Query: 1020 catctcattgaaggatgctgtgaaaggagacaatattgaggtgctgaatgtccactcaag 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 catctcattgaaggatgctgtgaaaggagacaatattgaggtgctgaatgtccactcaag 267
Query: 1080 gtgtgcagagttgaaattgcatgaacaaaatgaagttcnnnnnnngactaaagttctgaa 1139
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 266 gtgtgcagagttgaaattgcatgaacaaaatgaagttctttttttgactaaagttctgaa 207
Query: 1140 cattgaagtgacaaaattggattacatatcatctaatgatgaagatagtgaagatgaaga 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 cattgaagtgacaaaattggattacatatcatctaatgatgaagatagtgaagatgaaga 147
Query: 1200 agaacagggtgaagagcacacctcctaa 1227
||||||||||||||||||||||||||||
Sbjct: 146 agaacagggtgaagagcacacctcctaa 119
>gnl|LJGI|TC66866
Length = 1034
Score = 293 bits (148), Expect = 1e-78
Identities = 274/316 (86%)
Strand = Plus / Plus
Query: 766 atgtggattatgatgaaatatggtttcggagaatcatggactaaggtttttagcattgat 825
||||||||||||| | ||||||||||| |||||| ||||||||| |||| ||| |||||
Sbjct: 314 atgtggattatgaaggaatatggtttcaaagaatcgtggactaagattttcagctttgat 373
Query: 826 cccgtgggcagatatcgctggccttgtggtggtttatgttggccagtacaacaatttaaa 885
| || |||| ||||||||||||| |||||| |||| |||||||||| |||| |||||
Sbjct: 374 actatgagcagttatcgctggccttttggtggattatattggccagtaaaacactttaag 433
Query: 886 aatggtgctgctatgttgatgtatcattccgacaattgctttatctaccatgaacctgaa 945
|||||| ||||||| ||||||||||||||| |||||| |||||||||| ||||||||| |
Sbjct: 434 aatggttctgctatattgatgtatcattcctacaatttctttatctactatgaacctgga 493
Query: 946 aagcatagattcaaactttttaaggttcgtgggactcaatcatcatttgaggttattcct 1005
||| || |||||||| ||||||| |||||||||||||||||| |||||| |||||||||
Sbjct: 494 aaggatggattcaaaatttttaaagttcgtgggactcaatcaagatttgatgttattcct 553
Query: 1006 catttttccaatttcatctcattgaaggatgctgtgaaaggagacaatattgaggtgctg 1065
||| || | | ||| ||||| |||| |||| ||||||||||||||||||||||||||||
Sbjct: 554 catattcctagttttatctcgctgaaagatgttgtgaaaggagacaatattgaggtgctg 613
Query: 1066 aatgtccactcaaggt 1081
||||| ||||||||||
Sbjct: 614 aatgtgcactcaaggt 629
Score = 71.9 bits (36), Expect = 9e-12
Identities = 95/115 (82%), Gaps = 6/115 (5%)
Strand = Plus / Plus
Query: 521 gatttcctacttgtgtgagtggagcacttcattggattagtttttattacaggac----- 575
|||||||||||||||| ||||| |||||||||||||| ||| ||| || ||||
Sbjct: 102 gatttcctacttgtgttagtggggcacttcattggatcggttcctatcacgggactctat 161
Query: 576 -aatattgtgttttgactttgaaggtgagaggttccaatccttcccttctcctcc 629
|||||||||||| ||||||||| | |||||||||| ||||||||| |||||||
Sbjct: 162 caatattgtgtttcgactttgaaagcgagaggttccggtccttccctactcctcc 216
Score = 65.9 bits (33), Expect = 6e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 667 accatgggagaattaaggggatctctttacatatgtgattc 707
|||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 248 accatgggagaattgaggggctctctttacatatgtgattc 288
Score = 61.9 bits (31), Expect = 9e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 414 tatggctgttgaaatgcacacactagggacatcaacatggaagaatgttga 464
|||||||| |||| ||||||| ||||||||||||||||||| |||||||||
Sbjct: 25 tatggctgctgaagtgcacac-ctagggacatcaacatggaggaatgttga 74
>gnl|LJGI|TC69956 similar to UniRef100_A7Z3J5 Cluster: PenP; n=1; Bacillus
amyloliquefaciens FZB42|Rep: PenP - Bacillus
amyloliquefaciens (strain FZB42), partial (5%)
Length = 1185
Score = 188 bits (95), Expect = 6e-47
Identities = 223/266 (83%), Gaps = 6/266 (2%)
Strand = Plus / Plus
Query: 852 tggtggtttatgttggccagtacaacaatttaaaaatggtgctgctatgttgatgtatca 911
|||| |||||| |||||||||| |||| ||| | |||||||||||| | |||||||||||
Sbjct: 775 tggtagtttatattggccagtaaaacactttcagaatggtgctgctttattgatgtatca 834
Query: 912 ttccgacaattgctttatctaccatgaacctgaaaagcatagattcaaactttttaaggt 971
||| |||||||||||||||| |||||||||||| | || |||||| | ||||||||||
Sbjct: 835 ttcttgcaattgctttatctactatgaacctgaaaggtatggattcagattttttaaggt 894
Query: 972 tcgtgggactcaatcatcatttgaggttattcctcatttttccaatttcatctcattgaa 1031
|||||| |||| |||||||| | |||||||| || | | | | |||||| | ||
Sbjct: 895 tcgtgg------atcaaaatttgaggctgttcctcatgttcctagtcttatctcactaaa 948
Query: 1032 ggatgctgtgaaaggagacaatattgaggtgctgaatgtccactcaaggtgtgcagagtt 1091
|| ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |
Sbjct: 949 gggtgctgtgaaaggagataatattgaggtgatgaatgtccactcaaggtgtgaagaggt 1008
Query: 1092 gaaattgcatgaacaaaatgaagttc 1117
||||||||| ||| |||| |||||||
Sbjct: 1009 gaaattgcaagaagaaaaagaagttc 1034
Score = 109 bits (55), Expect = 4e-23
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 171 tgtggtgaattcttgtaatggcttgctttgtttgtctaatctggacagagactattttgt 230
|||||||||||||||||||||||||||||| |||||| || |||| ||| ||||| ||||
Sbjct: 178 tgtggtgaattcttgtaatggcttgctttgcttgtctgatatggaaagaaactatcttgt 237
Query: 231 tgtttgcaacccaataacaggtgagttcataagacttcc 269
||||||||| ||| | | |||||||||||| ||||||||
Sbjct: 238 tgtttgcaatccagttataggtgagttcattagacttcc 276
Score = 91.7 bits (46), Expect = 1e-17
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 325 ggttttggtttccaacccaaaactaatgaatataaggtggtaagaatatt 374
|||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 329 ggttttggtttccaacccaaaactaatgaatacaaggtggtaagaatatt 378
>gnl|LJGI|TC59897
Length = 761
Score = 99.6 bits (50), Expect = 4e-20
Identities = 143/174 (82%)
Strand = Plus / Plus
Query: 766 atgtggattatgatgaaatatggtttcggagaatcatggactaaggtttttagcattgat 825
||||||||||||| | | |||||| | | |||||||||||||| || ||| |||||||||
Sbjct: 22 atgtggattatgaaggactatggtgttgaagaatcatggactagggctttcagcattgat 81
Query: 826 cccgtgggcagatatcgctggccttgtggtggtttatgttggccagtacaacaatttaaa 885
| || |||||| | ||||||| ||||||||||| |||||| |||||| |||||||
Sbjct: 82 actatgataagatattgttggccttatggtggtttatattggcctgtacaaaaatttaag 141
Query: 886 aatggtgctgctatgttgatgtatcattccgacaattgctttatctaccatgaa 939
| | ||||||||| ||| |||||||||| |||||||||||||||| |||||
Sbjct: 142 agtcctgctgctatattgttgtatcattcatccaattgctttatctactatgaa 195
>gnl|LJGI|TC58021
Length = 805
Score = 69.9 bits (35), Expect = 4e-11
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 171 tgtggtgaattcttgtaatggcttgctttgtttgtctaatctggacagagactattttgt 230
|||||||||||||||| ||| || ||||| |||| | ||| ||| ||| ||||||||
Sbjct: 625 tgtggtgaattcttgtgctggtttcctttgcttgtgtgatcgaaacaaagagtattttgt 684
Query: 231 tgtttgcaacccaataacaggtgagttcataagacttcc 269
||||||||||||||| | ||||||||| || ||||||||
Sbjct: 685 tgtttgcaacccaattataggtgagtttatcagacttcc 723