Miyakogusa Predicted Gene
- Lj6g3v1055630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1055630.1 Non Chatacterized Hit- tr|I1KCZ4|I1KCZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49346 PE,94.4,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
HELICASE_ATP_BIND_1,Helicase, superfamily,CUFF.58871.1
(1917 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64545 homologue to UniRef100_A7PDE9 Cluster: Chromoso... 1183 0.0
gnl|LJGI|AV779640 homologue to UniRef100_A7PDE9 Cluster: Chromos... 783 0.0
>gnl|LJGI|TC64545 homologue to UniRef100_A7PDE9 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 1112
Score = 1183 bits (597), Expect = 0.0
Identities = 600/601 (99%)
Strand = Plus / Plus
Query: 1317 aatttccgttgctgccatgctttctgttggcaactcaatattttaccgcccaaaggataa 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aatttccgttgctgccatgctttctgttggcaactcaatattttaccgcccaaaggataa 61
Query: 1377 acaagtacatgcagacaatgcgaggatgaactttcacacaggaaatgttggagaccatat 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acaagtacatgcagacaatgcgaggatgaactttcacacaggaaatgttggagaccatat 121
Query: 1437 tgcattgctgaaggtctacaattcctggaaggagaccaattattcaacccaatggtgtta 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgcattgctgaaggtctacaattcctggaaggagaccaattattcaacccaatggtgtta 181
Query: 1497 tgagaattatatacaggtaagaagtatgaaacaagctagggatatccgtgatcaacttgc 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgagaattatatacaggtaagaagtatgaaacaagctagggatatccgtgatcaacttgc 241
Query: 1557 aggtctattagagagggttgagatcgaactcacttcaaatcctaatgatttagatgccgt 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggtctattagagagggttgagatcgaactcacttcaaatcctaatgatttagatgccgt 301
Query: 1617 caagaaatccataacatctggatttttcccacactctgcacgactgcaaaagaatggatc 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caagaaatccataacatctggatttttcccacactctgcacgactgcaaaagaatggatc 361
Query: 1677 atatcgaactgttaaacatccacagactgttcacatacatcctagttcggggctagcaca 1736
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 362 atatcgaactgttaaacatccacagactgttcacatacatcctagtttggggctagcaca 421
Query: 1737 gattcttcctagatgggttgtatactatgaactagtactcacaaccaaggaatacatgag 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gattcttcctagatgggttgtatactatgaactagtactcacaaccaaggaatacatgag 481
Query: 1797 acaggttacagaattaaagccagagtggttggtggagatagcccctcactattaccagct 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acaggttacagaattaaagccagagtggttggtggagatagcccctcactattaccagct 541
Query: 1857 taaagatgttgaagatccgacgtccaagaaaatgccccgtggagaaggacgtgcaacata 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 taaagatgttgaagatccgacgtccaagaaaatgccccgtggagaaggacgtgcaacata 601
Query: 1917 g 1917
|
Sbjct: 602 g 602
>gnl|LJGI|AV779640 homologue to UniRef100_A7PDE9 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 428
Score = 783 bits (395), Expect = 0.0
Identities = 423/430 (98%), Gaps = 3/430 (0%)
Strand = Plus / Minus
Query: 1108 ggtattcatgacttgttacactttgattttatggatcctccgccggctgaggccttactg 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggtattcatgacttgttacactttgattttatggatcctccgccggctgaggccttactg 369
Query: 1168 aaagcc-ctggagcttctatttgctttaagtgcattaaataagcttggtgagttaactaa 1226
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaagcctctggagcttctatttgctttaagtgcattaaataagcttggtgagttaactaa 309
Query: 1227 ggtaggtagacggatggcagagttcccacttgatcctatgttgtcaaaaatgatagtggc 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtaggtagacggatggcagagttcccacttgatcctatgttgtcaaaaatgatagtggc 249
Query: 1287 ttcagaaaagtacaaatgttcagatgatataatttccgttgctgccatgctttctgttgg 1346
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 248 ttcagaaaagtacaaatgttcagatgata--atttccgttgctgccatgctttctgttgg 191
Query: 1347 caactcaatattttaccgcccaaaggataaacaagtacatgcagacaatgcgaggatgaa 1406
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 190 caactcaatattttaccgcccgaaggataaacaagtacatgcagactatgcgaggatgaa 131
Query: 1407 ctttcacacaggaaatgttggagaccatattgcattgctgaaggtctacaattcctggaa 1466
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ctttcacacaggcaatgttggagaccatattgcattgctgaaggtctacaattcctggaa 71
Query: 1467 ggagaccaattattcaacccaatggtgttatgagaattatatacaggtaagaagtatgaa 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 70 ggagaccaattattcaacccaatggtgttatgagaattatatacaggtaagaaatatgaa 11
Query: 1527 acaagctagg 1536
||||||||||
Sbjct: 10 acaagctagg 1