Miyakogusa Predicted Gene
- Lj6g3v1052290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1052290.1 Non Chatacterized Hit- tr|I1M870|I1M870_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25945
PE,51.56,0.00003,seg,NULL,NODE_54696_length_973_cov_33.594040.path2.1
(610 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81045 weakly similar to UniRef100_UPI0000141A8E Clust... 478 e-134
gnl|LJGI|TC82370 homologue to UniRef100_Q492H9 Cluster: NADH deh... 56 3e-07
>gnl|LJGI|TC81045 weakly similar to UniRef100_UPI0000141A8E Cluster: tetra-peptide
repeat homeobox-like (TPRXL) on chromosome 3; n=1; Homo
sapiens|Rep: tetra-peptide repeat homeobox-like (TPRXL)
on chromosome 3 - Homo sapiens, partial (19%)
Length = 1052
Score = 478 bits (241), Expect = e-134
Identities = 250/253 (98%)
Strand = Plus / Plus
Query: 358 cctcttcgcgttctcccccgtgccgcgtgtcctcgcgttcgtcttccccgcggcgaggtt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cctcttcgcgttctcccccgtgccgcgtgtcctcgcgttcgtcttccccgcggcgaggtt 537
Query: 418 accgatcctcgccgtcgggtcggtcgtggaggtttacctgatggcggtgatgagccccgg 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 538 accgatcctcgccgtcgggtcggtcgtggaggtttacctgatggcggtgatgagcctcgg 597
Query: 478 aattgtcgtcaccgtcgcggaggagaggcgaggatgggaagctgtaactgtcgggtcggg 537
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 598 aattgtcgtctccgtcgcggaggagaggctaggatgggaagctgtaactgtcgggtcggg 657
Query: 538 tttgatgcgggggaggcgggtttgcgggtgggttttgtcgggtctgtttgttttggtttc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tttgatgcgggggaggcgggtttgcgggtgggttttgtcgggtctgtttgttttggtttc 717
Query: 598 gggtttgattaat 610
|||||||||||||
Sbjct: 718 gggtttgattaat 730
Score = 167 bits (84), Expect = 1e-40
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 165 gcgtcgtctccacgcgcgtcgagtctggccacgtcttagaagagtcccgtgtcaacgcca 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gcgtcgtctccacgcgcgtcgagtctggccacgtcttagaagagtcccgtgtcaacgcca 287
Query: 225 tctcgctcatccgcaccagaggcg 248
||||||||||||||||||||||||
Sbjct: 288 tctcgctcatccgcaccagaggcg 311
Score = 139 bits (70), Expect = 2e-32
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 atggtgacaccaaacgaattcctctactctttcatttcaccactgaaaatcctcttcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 atggtgacaccaaacgaattcctctactctttcatttcaccactgaaaatcctcttcgac 82
Query: 61 tctctcagaa 70
||||||||||
Sbjct: 83 tctctcagaa 92
Score = 125 bits (63), Expect = 3e-28
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 296 gccgtacacgccacaatctcatcattcaacggcaagcacgcatctgtttcctccgcgatc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gccgtacacgccacaatctcatcattcaacggcaagcacgcatctgtttcctccgcgatc 418
Query: 356 acc 358
|||
Sbjct: 419 acc 421
>gnl|LJGI|TC82370 homologue to UniRef100_Q492H9 Cluster: NADH dehydrogenase I chain
E; n=1; Candidatus Blochmannia pennsylvanicus str.
BPEN|Rep: NADH dehydrogenase I chain E - Blochmannia
pennsylvanicus (strain BPEN), partial (7%)
Length = 537
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 554 cgggtttgcgggtgggttttgtcgggtctgtttgttttgg 593
|||||||||||||||||| |||||||| |||| |||||||
Sbjct: 15 cgggtttgcgggtgggttctgtcgggtttgttcgttttgg 54