Miyakogusa Predicted Gene

Lj6g3v1052230.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1052230.1 Non Chatacterized Hit- tr|B9RJQ7|B9RJQ7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,76.24,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.58853.1
         (3027 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62441 similar to UniRef100_A7NUT8 Cluster: Chromosome...   969   0.0  

>gnl|LJGI|TC62441 similar to UniRef100_A7NUT8 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (15%)
          Length = 944

 Score =  969 bits (489), Expect = 0.0
 Identities = 489/489 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2539 atttgtgctgagtaccaagcaacaggtcctgctgcaaagatactttaccagaaggagcaa 2598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    atttgtgctgagtaccaagcaacaggtcctgctgcaaagatactttaccagaaggagcaa 61

                                                                        
Query: 2599 gctaaggaatcctcaaaacaacttctgaactacgctagtggaagatggaatccacttata 2658
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   gctaaggaatcctcaaaacaacttctgaactacgctagtggaagatggaatccacttata 121

                                                                        
Query: 2659 gacccttcttctcccatttcaggggcatcaagtgagcatcaaaggttaaaacttgcaaac 2718
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  gacccttcttctcccatttcaggggcatcaagtgagcatcaaaggttaaaacttgcaaac 181

                                                                        
Query: 2719 cgacaacgttgccggactgaagttttaagctttgacggcagcattcttaggtcttatgcc 2778
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  cgacaacgttgccggactgaagttttaagctttgacggcagcattcttaggtcttatgcc 241

                                                                        
Query: 2779 ttaagtccggtttatgaagctgccacgaggcctattgaagaagcctctccaccagccagc 2838
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  ttaagtccggtttatgaagctgccacgaggcctattgaagaagcctctccaccagccagc 301

                                                                        
Query: 2839 acgataaaagctgaaccagatgaaaatgatagtaaagaagtaattcttcccggagtaaat 2898
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  acgataaaagctgaaccagatgaaaatgatagtaaagaagtaattcttcccggagtaaat 361

                                                                        
Query: 2899 attatttttgatggttctgagttgcatccgtttgacattggtgcctgcatccaggcacgc 2958
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  attatttttgatggttctgagttgcatccgtttgacattggtgcctgcatccaggcacgc 421

                                                                        
Query: 2959 caacctatttccttaatagctgaggcagcagctgcttcagcaccactctatgctatccat 3018
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  caacctatttccttaatagctgaggcagcagctgcttcagcaccactctatgctatccat 481

                     
Query: 3019 ccatgaatg 3027
            |||||||||
Sbjct: 482  ccatgaatg 490