Miyakogusa Predicted Gene

Lj6g3v1050180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1050180.1 tr|B9IM52|B9IM52_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_578659 PE=4
SV=1,41.6,0.0000000009,seg,NULL,CUFF.58832.1
         (921 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81045 weakly similar to UniRef100_UPI0000141A8E Clust...  1160   0.0  
gnl|LJGI|TC82370 homologue to UniRef100_Q492H9 Cluster: NADH deh...    56   4e-07

>gnl|LJGI|TC81045 weakly similar to UniRef100_UPI0000141A8E Cluster: tetra-peptide
           repeat homeobox-like (TPRXL) on chromosome 3; n=1; Homo
           sapiens|Rep: tetra-peptide repeat homeobox-like (TPRXL)
           on chromosome 3 - Homo sapiens, partial (19%)
          Length = 1052

 Score = 1160 bits (585), Expect = 0.0
 Identities = 585/585 (100%)
 Strand = Plus / Plus

                                                                       
Query: 337 gccgtacacgccacaatctcatcattcaacggcaagcacgcatctgtttcctccgcgatc 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gccgtacacgccacaatctcatcattcaacggcaagcacgcatctgtttcctccgcgatc 418

                                                                       
Query: 397 accgccgttaaaacaacctggaagcgcccttcggtaaccgccatcttcgcatacacgatc 456
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 accgccgttaaaacaacctggaagcgcccttcggtaaccgccatcttcgcatacacgatc 478

                                                                       
Query: 457 ctcttcgcgttctcccccgtgccgcgtgtcctcgcgttcgtcttccccgcggcgaggtta 516
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctcttcgcgttctcccccgtgccgcgtgtcctcgcgttcgtcttccccgcggcgaggtta 538

                                                                       
Query: 517 ccgatcctcgccgtcgggtcggtcgtggaggtttacctgatggcggtgatgagcctcgga 576
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ccgatcctcgccgtcgggtcggtcgtggaggtttacctgatggcggtgatgagcctcgga 598

                                                                       
Query: 577 attgtcgtctccgtcgcggaggagaggctaggatgggaagctgtaactgtcgggtcgggt 636
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 attgtcgtctccgtcgcggaggagaggctaggatgggaagctgtaactgtcgggtcgggt 658

                                                                       
Query: 637 ttgatgcgggggaggcgggtttgcgggtgggttttgtcgggtctgtttgttttggtttcg 696
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ttgatgcgggggaggcgggtttgcgggtgggttttgtcgggtctgtttgttttggtttcg 718

                                                                       
Query: 697 ggtttgattaatcgtagggtggaggagttgttggagggtgaggattcgattagtgtttgg 756
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ggtttgattaatcgtagggtggaggagttgttggagggtgaggattcgattagtgtttgg 778

                                                                       
Query: 757 gatcggacggttctgatttgttggtatgggttagtggtgcttttgagttatgtgattacc 816
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gatcggacggttctgatttgttggtatgggttagtggtgcttttgagttatgtgattacc 838

                                                                       
Query: 817 actgtgttttactgtgatagtaggaaacgtcatgcaattagagaacctcaagtggaagaa 876
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 actgtgttttactgtgatagtaggaaacgtcatgcaattagagaacctcaagtggaagaa 898

                                                        
Query: 877 gatgatgattgtgagggtagtgttttggttggatcctcactgtaa 921
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 gatgatgattgtgagggtagtgttttggttggatcctcactgtaa 943



 Score =  232 bits (117), Expect = 3e-60
 Identities = 117/117 (100%)
 Strand = Plus / Plus

                                                                       
Query: 173 gctaccagatctaccacctccaagccctcgctcgcgtcgtctccacgcgcgtcgagtctg 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gctaccagatctaccacctccaagccctcgctcgcgtcgtctccacgcgcgtcgagtctg 254

                                                                    
Query: 233 gccacgtcttagaagagtcccgtgtcaacgccatctcgctcatccgcaccagaggcg 289
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gccacgtcttagaagagtcccgtgtcaacgccatctcgctcatccgcaccagaggcg 311



 Score =  139 bits (70), Expect = 3e-32
 Identities = 70/70 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atggtgacaccaaacgaattcctctactctttcatttcaccactgaaaatcctcttcgac 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 atggtgacaccaaacgaattcctctactctttcatttcaccactgaaaatcctcttcgac 82

                    
Query: 61 tctctcagaa 70
          ||||||||||
Sbjct: 83 tctctcagaa 92


>gnl|LJGI|TC82370 homologue to UniRef100_Q492H9 Cluster: NADH dehydrogenase I chain
           E; n=1; Candidatus Blochmannia pennsylvanicus str.
           BPEN|Rep: NADH dehydrogenase I chain E - Blochmannia
           pennsylvanicus (strain BPEN), partial (7%)
          Length = 537

 Score = 56.0 bits (28), Expect = 4e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 652 cgggtttgcgggtgggttttgtcgggtctgtttgttttgg 691
           |||||||||||||||||| |||||||| |||| |||||||
Sbjct: 15  cgggtttgcgggtgggttctgtcgggtttgttcgttttgg 54