Miyakogusa Predicted Gene
- Lj6g3v1049120.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1049120.2 Non Chatacterized Hit- tr|I1KDG6|I1KDG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16883
PE,87.78,0,SecY,SecY/SEC61-alpha family; SECY_1,SecY/SEC61-alpha
family; SECY_2,SecY/SEC61-alpha family; 3a0501,CUFF.58836.2
(1614 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76508 similar to UniRef100_Q38885 Cluster: Preprotein... 910 0.0
gnl|LJGI|AV425570 homologue to UniRef100_Q9XQU4 Cluster: Preprot... 829 0.0
gnl|LJGI|AV768715 homologue to UniRef100_Q9XQU4 Cluster: Preprot... 333 2e-90
>gnl|LJGI|TC76508 similar to UniRef100_Q38885 Cluster: Preprotein translocase subunit
secY, chloroplast precursor; n=1; Arabidopsis
thaliana|Rep: Preprotein translocase subunit secY,
chloroplast precursor - Arabidopsis thaliana (Mouse-ear
cress), partial (18%)
Length = 501
Score = 910 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Plus
Query: 1 atgttgataacggtcagacaagcttcatcttctcccctctgtctcttccttgatcgcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 atgttgataacggtcagacaagcttcatcttctcccctctgtctcttccttgatcgcctc 102
Query: 61 accgtctcaaaaccctcctctaaatcattcaaaacttccatttgccaagctcacagaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 accgtctcaaaaccctcctctaaatcattcaaaacttccatttgccaagctcacagaaca 162
Query: 121 ccctcaccctcccattcatggagttctgggaatctctctaccagctatgaggctgcaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ccctcaccctcccattcatggagttctgggaatctctctaccagctatgaggctgcaaat 222
Query: 181 tttgatcccttgggtatcaacccagatttatcttctggactgagttctacatggaaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tttgatcccttgggtatcaacccagatttatcttctggactgagttctacatggaaagat 282
Query: 241 cttgtgtgcttgttttcgcaaccatttgagagcacttcaagtacagaaaaggggaaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cttgtgtgcttgttttcgcaaccatttgagagcacttcaagtacagaaaaggggaaacct 342
Query: 301 aactcgtcgcgaggagtagcagctgcaattgaggacagttcaattgattttggcgacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aactcgtcgcgaggagtagcagctgcaattgaggacagttcaattgattttggcgacttc 402
Query: 361 ttcaaaggtccactgccagggaagtttctgaagcttttggggtttcttgtcttgtcacgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttcaaaggtccactgccagggaagtttctgaagcttttggggtttcttgtcttgtcacgg 462
Query: 421 cttggtgtgtacatacctctaggtggggttaatagggag 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cttggtgtgtacatacctctaggtggggttaatagggag 501
>gnl|LJGI|AV425570 homologue to UniRef100_Q9XQU4 Cluster: Preprotein translocase
subunit secY, chloroplast precursor; n=1; Pisum
sativum|Rep: Preprotein translocase subunit secY,
chloroplast precursor - Pisum sativum (Garden pea),
partial (26%)
Length = 420
Score = 829 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Plus
Query: 492 gttaagcactctggactcattttctggtggaggtattggtagacttgggctgtgttccct 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gttaagcactctggactcattttctggtggaggtattggtagacttgggctgtgttccct 62
Query: 552 cggtattgttcccttcatcaatgcgcaaattgttttccagcttcttgcacaagtataccc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cggtattgttcccttcatcaatgcgcaaattgttttccagcttcttgcacaagtataccc 122
Query: 612 caagttgcaagatcttcagaaacgagagggtgaggctggaagaaagaaaattcttcagta 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 caagttgcaagatcttcagaaacgagagggtgaggctggaagaaagaaaattcttcagta 182
Query: 672 cactcgatatgcttcagttggatttgccattgtacaggcgattggccaagttcttttcct 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cactcgatatgcttcagttggatttgccattgtacaggcgattggccaagttcttttcct 242
Query: 732 acgcccctatgtcaatgacttctcaacagagtgggttatttcctctgttatcttattgac 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 acgcccctatgtcaatgacttctcaacagagtgggttatttcctctgttatcttattgac 302
Query: 792 acttggttctgcgtttacaacgtacatcggcgaacgaattactgacctaaaacttgggaa 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 acttggttctgcgtttacaacgtacatcggcgaacgaattactgacctaaaacttgggaa 362
Query: 852 tggcacatctcttttgattttcacaaacattatctcctacttgccagcttcctttggt 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tggcacatctcttttgattttcacaaacattatctcctacttgccagcttcctttggt 420
>gnl|LJGI|AV768715 homologue to UniRef100_Q9XQU4 Cluster: Preprotein translocase subunit
secY, chloroplast precursor; n=1; Pisum sativum|Rep:
Preprotein translocase subunit secY, chloroplast
precursor - Pisum sativum (Garden pea), partial (10%)
Length = 413
Score = 333 bits (168), Expect = 2e-90
Identities = 174/176 (98%)
Strand = Plus / Minus
Query: 1439 gtccagcagtagttgagcaaaccacacacttgactgcattccgggggtttgctggaacat 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtccagcagtagttgagcaaaccacacacttgactgcattccgggggtttgctggaacat 354
Query: 1499 ctattcttattcttgttggttgtgcaacagacacagcaaggaaagttcaggctgagatta 1558
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 353 ccattcttattcttgttggttgggcaacagacacagcaaggaaagttcaggctgagatta 294
Query: 1559 tatcccaaaagtacaagaacattgagttctatgactttgataaaaagtattgattt 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tatcccaaaagtacaagaacattgagttctatgactttgataaaaagtattgattt 238