Miyakogusa Predicted Gene
- Lj6g3v1048930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1048930.1 tr|F4Q6Z5|F4Q6Z5_DICFS Transmembrane protein
OS=Dictyostelium fasciculatum (strain SH3) GN=tmem208
P,35.29,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Protein of
unknown function DUF788, TMEM208; DUF788,Prote,CUFF.58815.1
(522 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58630 similar to UniRef100_A7PTL6 Cluster: Chromosome... 1035 0.0
gnl|LJGI|TC68511 similar to UniRef100_A7PTL6 Cluster: Chromosome... 426 e-119
gnl|LJGI|GO006147 similar to UniRef100_A7PTL6 Cluster: Chromosom... 339 1e-92
>gnl|LJGI|TC58630 similar to UniRef100_A7PTL6 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 905
Score = 1035 bits (522), Expect = 0.0
Identities = 522/522 (100%)
Strand = Plus / Plus
Query: 1 atggcgaatcaaggagctaagaaacgcaaggaagagaacgttcgtcacatggctaggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atggcgaatcaaggagctaagaaacgcaaggaagagaacgttcgtcacatggctaggctc 95
Query: 61 cgccaagtcatcatcgcctgcaatgttgtgtatgtgttgataaggatgttgatcttccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 cgccaagtcatcatcgcctgcaatgttgtgtatgtgttgataaggatgttgatcttccac 155
Query: 121 tcctccttcacctggaagcactggattggcttggtaatcacctctgctgcttacttgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tcctccttcacctggaagcactggattggcttggtaatcacctctgctgcttacttgatt 215
Query: 181 ccttatcagcagcttgctaagatggcaaaccctgcttatgcacaagatggtgaactcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ccttatcagcagcttgctaagatggcaaaccctgcttatgcacaagatggtgaactcttg 275
Query: 241 gatggtggctttgatatgaccacaggtggtgtttgtggctatttacatgatgtgatctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gatggtggctttgatatgaccacaggtggtgtttgtggctatttacatgatgtgatctac 335
Query: 301 ataacatgctttgtgcaagtcatgtccatcatctctggaaagttttggtacatatatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ataacatgctttgtgcaagtcatgtccatcatctctggaaagttttggtacatatatctt 395
Query: 361 gtgatacctgcttttggtctataccaatcctttggcttcattagaggatttttgccacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gtgatacctgcttttggtctataccaatcctttggcttcattagaggatttttgccacaa 455
Query: 421 ggttcagaggaatcagtcgaagatgaaaagactcgcaagaagagagaaaagctggagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggttcagaggaatcagtcgaagatgaaaagactcgcaagaagagagaaaagctggagaag 515
Query: 481 aaggcgtccagacctaagtttgtcaagtcaagaactagatag 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaggcgtccagacctaagtttgtcaagtcaagaactagatag 557
>gnl|LJGI|TC68511 similar to UniRef100_A7PTL6 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 768
Score = 426 bits (215), Expect = e-119
Identities = 448/525 (85%), Gaps = 3/525 (0%)
Strand = Plus / Plus
Query: 1 atggcgaatcaaggagctaagaaacgcaaggaagagaacgttcgtcacatggctaggctc 60
|||||||| || || ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 56 atggcgaaacagggtgctaagaaacgcaaggatgagaacgctcgtcacatggctaggctc 115
Query: 61 cgccaagtcatcatcgcctgcaatgttgtgtatgtgttgataaggatgttgatcttccac 120
|||| |||||||||||||||| ||| | ||||| | ||||||||||| ||| | ||
Sbjct: 116 cgccttatcatcatcgcctgcaacgttatttatgtaataataaggatgtttttctactac 175
Query: 121 tcctccttcacctggaagcactggattggcttggtaatcacctctgctgcttacttgatt 180
||| ||||||||||||| |||||||||||| |||| | || ||| || || | ||
Sbjct: 176 tccaccttcacctggaaacactggattggcctggttgtgacttctctagcatattatgtt 235
Query: 181 ccttatcagcagcttgctaagatggcaaaccctgcttatgcacaagatggtgaactcttg 240
|| ||||| || |||| ||||||||||| |||| ||| || |||||||||| || ||
Sbjct: 236 ccctatcaacaacttgataagatggcaacccctagttacgctgaagatggtgagctttta 295
Query: 241 gatggtggctttgatatgaccacaggtggtgtttgtggctatttacatgatgtgatctac 300
|||||||| ||||||||| | || ||||| ||||||||||||||||||||| | ||||||
Sbjct: 296 gatggtgggtttgatatggctactggtggggtttgtggctatttacatgatattatctac 355
Query: 301 ataacatgctttgtgcaagtcatgtccatcatctctggaaagttttggtacatatatctt 360
||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||
Sbjct: 356 ataacatgctttgtgcaagtcgcgtccatcatctctggaaagttctggtacacatacctt 415
Query: 361 gtgatacctgcttttggtctataccaatcctttggcttcattagaggatttttgccacaa 420
|||||||| |||||||| |||||| || |||||||| |||| ||||||||||||||||
Sbjct: 416 gtgataccggcttttggagcataccagtcttttggcttaattaaaggatttttgccacaa 475
Query: 421 ggt---tcagaggaatcagtcgaagatgaaaagactcgcaagaagagagaaaagctggag 477
||| |||||||||||| |||||||||||||| ||||||||||| |||||| |||||
Sbjct: 476 ggttcatcagaggaatcatatgaagatgaaaagacccgcaagaagagggaaaagttggag 535
Query: 478 aagaaggcgtccagacctaagtttgtcaagtcaagaactagatag 522
|||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 536 aagaaggcatccagacctaagtttgtcaagacaagaactagatag 580
>gnl|LJGI|GO006147 similar to UniRef100_A7PTL6 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (92%)
Length = 598
Score = 339 bits (171), Expect = 1e-92
Identities = 404/481 (83%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 1 atggcgaatcaaggagctaagaaacgcaaggaagagaacgttcgtcacatggctaggctc 60
|||||||| || || ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 118 atggcgaaacagggtgctaagaaacgcaaggatgagaacgctcgtcacatggctaggctc 177
Query: 61 cgccaagtcatcatcgcctgcaatgttgtgtatgtgttgataaggatgttgatcttccac 120
|||| |||||||||||||||| ||| | ||||| | ||||||||||| ||| | ||
Sbjct: 178 cgccttatcatcatcgcctgcaacgttatttatgtaataataaggatgtttttctactac 237
Query: 121 tcctccttcacctggaagcactggattggcttggtaatcacctctgctgcttacttgatt 180
||| ||||||||||||| |||||||||||| |||| | || ||| || || | ||
Sbjct: 238 tccaccttcacctggaaacactggattggcctggttgtgacttctctagcatattatgtt 297
Query: 181 ccttatcagcagcttgctaagatggcaaaccctgcttatgcacaagatggtgaactcttg 240
|| ||||| || |||| || |||||||| |||| ||| || |||||||||| || ||
Sbjct: 298 ccctatcaacaacttgataggatggcaacccctagttacgctgaagatggtgagctttta 357
Query: 241 gatggtggctttgatatgaccacaggtggtgtttgtggctatttacatgatgtgatctac 300
|||||||| ||||||||| | || ||||| ||||||||||||||||||||| | ||||||
Sbjct: 358 gatggtgggtttgatatggctactggtggggtttgtggctatttacatgatattatctac 417
Query: 301 ataacatgctttgtgcaagtcatgtccatcatctctggaaagttttggtacatatatctt 360
||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||
Sbjct: 418 ataacatgctttgtgcaagtcgcgtccatcatctctggaaagttctggtacacatacctt 477
Query: 361 gtgatacctgcttttggtctataccaatcctttggcttcattagaggatttttgccacaa 420
|||||||| ||||||| |||||| || |||||||| |||| ||||||||||||||||
Sbjct: 478 gtgataccggcttttgaagcataccagtcttttggcttaattaaaggatttttgccacaa 537
Query: 421 ggt---tcagaggaatcagtcgaagatgaaaagactcgcaagaagagagaaaagctggag 477
||| |||||||||||| |||||||||||||| ||||||||||| |||||| |||||
Sbjct: 538 ggttcatcagaggaatcatatgaagatgaaaagacccgcaagaagagggaaaagttggag 597
Query: 478 a 478
|
Sbjct: 598 a 598