Miyakogusa Predicted Gene
- Lj6g3v1048880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1048880.1 Non Chatacterized Hit- tr|K4C831|K4C831_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,28.63,0.000000006,AP2,AP2/ERF domain; seg,NULL; DNA-binding
domain in plant proteins such as,AP2/ERF domain;
SUBFAMILY,CUFF.58806.1
(774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75721 similar to UniRef100_Q94AN4 Cluster: AP2-like e... 149 3e-35
gnl|LJGI|DC594646 homologue to UniRef100_A7PFK0 Cluster: Chromos... 113 2e-24
gnl|LJGI|TC58976 homologue to UniRef100_A9JQY7 Cluster: AP2 prot... 52 5e-06
>gnl|LJGI|TC75721 similar to UniRef100_Q94AN4 Cluster: AP2-like ethylene-responsive
transcription factor At1g16060; n=1; Arabidopsis
thaliana|Rep: AP2-like ethylene-responsive transcription
factor At1g16060 - Arabidopsis thaliana (Mouse-ear
cress), partial (57%)
Length = 1390
Score = 149 bits (75), Expect = 3e-35
Identities = 198/239 (82%)
Strand = Plus / Plus
Query: 28 attggatcattaaggaggaaaagcagcggtttttctcgtggtgtctctaaatacaggggc 87
|||||||| ||||| || | |||||| || || ||||| || ||||| |||||||| ||
Sbjct: 442 attggatccttaagaagaagaagcagtgggttctctcgaggagtctcaaaatacagagga 501
Query: 88 gttgcaagacaccatcataatggaagatgggaggctcggattggcagggttttcggcaac 147
|||||||||||||| ||||| ||||||||||| ||||| ||||||||||| | ||||||
Sbjct: 502 gttgcaagacaccaccataacggaagatgggaagctcgaattggcagggtctcgggcaac 561
Query: 148 aagtacctttacctcggaacttatgctacacaagaagaagctgcaacagcatatgatatg 207
|| || || ||||| |||||||| ||||||||||||||||| || | ||||||||| | |
Sbjct: 562 aaatatctataccttggaacttacgctacacaagaagaagcagccatagcatatgacagg 621
Query: 208 gcagcaattgaatatcgtggactcaatgctgttaccaattttgacctaagccgttacat 266
||||| || | ||||| ||||| ||||| |||| || || ||||| |||||||||||
Sbjct: 622 gcagccataaagtatcgaggacttaatgccattacaaacttcgacctcagccgttacat 680
>gnl|LJGI|DC594646 homologue to UniRef100_A7PFK0 Cluster: Chromosome chr11
scaffold_14, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_14, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 551
Score = 113 bits (57), Expect = 2e-24
Identities = 144/173 (83%)
Strand = Plus / Plus
Query: 94 agacaccatcataatggaagatgggaggctcggattggcagggttttcggcaacaagtac 153
|||||||| ||||| ||||||||||| ||||| ||||||||||| | |||||||| ||
Sbjct: 378 agacaccaccataacggaagatgggaagctcgaattggcagggtctcgggcaacaaatat 437
Query: 154 ctttacctcggaacttatgctacacaagaagaagctgcaacagcatatgatatggcagca 213
|| ||||| |||||||| ||||||||||||||||| || | ||||||||| | ||||||
Sbjct: 438 ctataccttggaacttacgctacacaagaagaagcagccatagcatatgacagggcagcc 497
Query: 214 attgaatatcgtggactcaatgctgttaccaattttgacctaagccgttacat 266
|| | ||||| ||||| ||||| |||| || || ||||| |||||||||||
Sbjct: 498 ataaagtatcgaggacttaatgccattacaaacttcgacctcagccgttacat 550
>gnl|LJGI|TC58976 homologue to UniRef100_A9JQY7 Cluster: AP2 protein; n=1; Elaeis
guineensis|Rep: AP2 protein - Elaeis guineensis var.
tenera (Oil palm), partial (42%)
Length = 1188
Score = 52.0 bits (26), Expect = 5e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 174 tacacaagaagaagctgcaacagcatatgatatggcagcaat 215
||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 998 tacacaagaagaagctgcagaagcatatgacattgcagcaat 1039