Miyakogusa Predicted Gene

Lj6g3v1018400.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1018400.1 Non Chatacterized Hit- tr|I3SMC1|I3SMC1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,87.88,0.00000002,
,CUFF.58777.1
         (240 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74248 similar to UniRef100_A7P4H9 Cluster: Chromosome...   147   4e-35
gnl|LJGI|TC58225 similar to UniRef100_A7P4H9 Cluster: Chromosome...   147   4e-35
gnl|LJGI|FS355360 weakly similar to UniRef100_Q3E7F4 Cluster: Un...    94   5e-19
gnl|LJGI|GO041285 similar to UniRef100_A7R3P8 Cluster: Chromosom...    92   2e-18
gnl|LJGI|TC69596 similar to UniRef100_A7R3P8 Cluster: Chromosome...    54   4e-07

>gnl|LJGI|TC74248 similar to UniRef100_A7P4H9 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 890

 Score =  147 bits (74), Expect = 4e-35
 Identities = 89/94 (94%)
 Strand = Plus / Plus

                                                                       
Query: 70  gtatctgctttgaatgaggcaacaccaggaagtgttaggtcagttttcaaagcttgggaa 129
           ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 170 gtatctgctctcaatgaggcaacaccaggaagtgttaagtcagttttcaaagcttgggaa 229

                                             
Query: 130 gaccgtttgaattcttctgggaatcacttggaaa 163
           |||||||||||||||||||||  |||||||||||
Sbjct: 230 gaccgtttgaattcttctgggggtcacttggaaa 263


>gnl|LJGI|TC58225 similar to UniRef100_A7P4H9 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 789

 Score =  147 bits (74), Expect = 4e-35
 Identities = 89/94 (94%)
 Strand = Plus / Plus

                                                                       
Query: 70  gtatctgctttgaatgaggcaacaccaggaagtgttaggtcagttttcaaagcttgggaa 129
           ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 117 gtatctgctctcaatgaggcaacaccaggaagtgttaagtcagttttcaaagcttgggaa 176

                                             
Query: 130 gaccgtttgaattcttctgggaatcacttggaaa 163
           |||||||||||||||||||||  |||||||||||
Sbjct: 177 gaccgtttgaattcttctgggggtcacttggaaa 210


>gnl|LJGI|FS355360 weakly similar to UniRef100_Q3E7F4 Cluster: Uncharacterized protein
           At1g04020.2; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At1g04020.2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (12%)
          Length = 658

 Score = 93.7 bits (47), Expect = 5e-19
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                       
Query: 162 aaccaagggtgtaacggtggcccaaacactggcagacttagcgctctggccaataagcca 221
           |||||||||||||| |||||||||||  ||||||||||||| ||| |||||||| |||||
Sbjct: 582 aaccaagggtgtaatggtggcccaaaagctggcagacttagtgctttggccaatgagcca 523

                              
Query: 222 aagctattcagttgcttaa 240
           |||||||| ||| ||||||
Sbjct: 522 aagctatttagtggcttaa 504


>gnl|LJGI|GO041285 similar to UniRef100_A7R3P8 Cluster: Chromosome undetermined
           scaffold_553, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_553,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (24%)
          Length = 576

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 65/70 (92%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaagacattcttctatccttgtggaaca-tttcaaagaatgctactgttgcaaaaatc 59
           |||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |
Sbjct: 447 atgaagacattcttctatccttgtggaacattttcaaagattgctagtgttgcaaaaaac 388

                     
Query: 60  agatccatat 69
           ||| ||||||
Sbjct: 387 agacccatat 378


>gnl|LJGI|TC69596 similar to UniRef100_A7R3P8 Cluster: Chromosome undetermined
          scaffold_553, whole genome shotgun sequence; n=1; Vitis
          vinifera|Rep: Chromosome undetermined scaffold_553,
          whole genome shotgun sequence - Vitis vinifera (Grape),
          partial (24%)
          Length = 562

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 46/51 (90%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                             
Query: 20 cttgtggaacattt-caaagaatgctactgttgcaaaaatcagatccatat 69
          |||||||||||||| |||||| ||||| ||||||||||| |||| ||||||
Sbjct: 1  cttgtggaacattttcaaagattgctagtgttgcaaaaaacagacccatat 51