Miyakogusa Predicted Gene

Lj6g3v1018310.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1018310.1 Non Chatacterized Hit- tr|I1KSS9|I1KSS9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,95.91,0,WD_REPEATS_1,WD40 repeat, conserved site; WD40 REPEAT
PROTEIN,NULL; WD40 repeat-like,WD40-repeat-con,CUFF.58767.1
         (1545 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW630668 homologue to UniRef100_A7PCU9 Cluster: Chromos...   813   0.0  

>gnl|LJGI|BW630668 homologue to UniRef100_A7PCU9 Cluster: Chromosome chr17
           scaffold_12, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (26%)
          Length = 463

 Score =  813 bits (410), Expect = 0.0
 Identities = 410/410 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctacgctcgaaatcgaagctcgagacgtaatcaaaatcgtgcttcaattctgcaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54  atgtctacgctcgaaatcgaagctcgagacgtaatcaaaatcgtgcttcaattctgcaaa 113

                                                                       
Query: 61  gaaaactccttacaccaaacgtttcagacactgcagagcgagtgccaggtttctctcaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gaaaactccttacaccaaacgtttcagacactgcagagcgagtgccaggtttctctcaac 173

                                                                       
Query: 121 actgttgacagcattgaaaccttcgttgcggatatcaatagtggaagatgggatgccatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 actgttgacagcattgaaaccttcgttgcggatatcaatagtggaagatgggatgccatt 233

                                                                       
Query: 181 ttgcctcaagtttcgcagctcaagcttccccggaataaattggaggatttgtatgagcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ttgcctcaagtttcgcagctcaagcttccccggaataaattggaggatttgtatgagcag 293

                                                                       
Query: 241 attgtgttggaaatgattgagcttcgagagctggataccgcgcgtgccattttgaggcag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 attgtgttggaaatgattgagcttcgagagctggataccgcgcgtgccattttgaggcag 353

                                                                       
Query: 301 acgcaggtgatgggtgtcatgaaaaatgagcagccggaaagatatttgcgacttgagcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 acgcaggtgatgggtgtcatgaaaaatgagcagccggaaagatatttgcgacttgagcat 413

                                                             
Query: 361 cttttagttaggacttattttgacccaaatgaggcttaccaagactcaac 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cttttagttaggacttattttgacccaaatgaggcttaccaagactcaac 463