Miyakogusa Predicted Gene

Lj6g3v1018300.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1018300.1 Non Chatacterized Hit- tr|C5XMA3|C5XMA3_SORBI
Putative uncharacterized protein Sb03g023720
OS=Sorghu,51.95,0.00000000000005,seg,NULL; IGR,IGR protein
motif,CUFF.58766.1
         (333 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79767 homologue to UniRef100_A7PRP8 Cluster: Chromoso...   553   e-157

>gnl|LJGI|TC79767 homologue to UniRef100_A7PRP8 Cluster: Chromosome chr14
           scaffold_27, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (77%)
          Length = 426

 Score =  553 bits (279), Expect = e-157
 Identities = 286/287 (99%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  caactcaatcaccctgcttctcccgattcttctccaaatcttcatcaccgtatgtggtga 106
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1   caactcaatcaccctgcttctcccgattcttctccaaatcttcatcaccgt-tgtggtga 59

                                                                       
Query: 107 aggttggaataccggagtttcttaatggaataggcaaaggggttgaatcccatgttgcta 166
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  aggttggaataccggagtttcttaatggaataggcaaaggggttgaatcccatgttgcta 119

                                                                       
Query: 167 aacttgagactgaaattggtgattttcagagtcttcttgtcacccgcactctcaagctca 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aacttgagactgaaattggtgattttcagagtcttcttgtcacccgcactctcaagctca 179

                                                                       
Query: 227 agaaacttggtattccttgcaaacatagaaagttgattctaaagcacactcacaagtaca 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agaaacttggtattccttgcaaacatagaaagttgattctaaagcacactcacaagtaca 239

                                                          
Query: 287 ggctaggattgtggaggccacgtgctgaagctatcaaatcctgagta 333
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggctaggattgtggaggccacgtgctgaagctatcaaatcctgagta 286