Miyakogusa Predicted Gene
- Lj6g3v1008200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1008200.1 Non Chatacterized Hit- tr|A5BC54|A5BC54_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.22,0.00003,zf-RING_2,Zinc finger, RING-type; zf-RING_3,NULL; no
description,Zinc finger, RING/FYVE/PHD-type; RI,CUFF.58758.1
(897 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS317644 similar to UniRef100_A7PFX9 Cluster: Chromosom... 1463 0.0
gnl|LJGI|FS338625 similar to UniRef100_A7PFX9 Cluster: Chromosom... 1392 0.0
gnl|LJGI|TC78357 54 2e-06
>gnl|LJGI|FS317644 similar to UniRef100_A7PFX9 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 789
Score = 1463 bits (738), Expect = 0.0
Identities = 738/738 (100%)
Strand = Plus / Plus
Query: 6 gaaggaaagtgaaagagaaaggatgtcaagtgtagcaacatattggtgttacacatgcag 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 gaaggaaagtgaaagagaaaggatgtcaagtgtagcaacatattggtgttacacatgcag 111
Query: 66 gcagccaatcttgttagcagggagagatgtcacttgcccttattgtgatggaagctttgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 gcagccaatcttgttagcagggagagatgtcacttgcccttattgtgatggaagctttgt 171
Query: 126 gcaagaacttaatgagaggcaaggcattgcaccccaacatggcttttcatcattagatcc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gcaagaacttaatgagaggcaaggcattgcaccccaacatggcttttcatcattagatcc 231
Query: 186 tcaagcgcctgacatattcgatgctattcactctgttataggtcaaagaggttctgcacc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tcaagcgcctgacatattcgatgctattcactctgttataggtcaaagaggttctgcacc 291
Query: 246 tagaattgggcttagagatgctgttgacagttatatgaggcggagaatggctggtaatag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tagaattgggcttagagatgctgttgacagttatatgaggcggagaatggctggtaatag 351
Query: 306 agacccaaactttgatattagaagggggtctggttctggcctagttcctgaacagacttg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agacccaaactttgatattagaagggggtctggttctggcctagttcctgaacagacttg 411
Query: 366 gggtgtttttagttctggttcttatctgatagttcatgatcaaggtcctgggttctcctt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gggtgtttttagttctggttcttatctgatagttcatgatcaaggtcctgggttctcctt 471
Query: 426 gcctactggtagctcaagaggtgttcctagacgcgtcgaattcggtatgggtcctggact 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gcctactggtagctcaagaggtgttcctagacgcgtcgaattcggtatgggtcctggact 531
Query: 486 agaacaacttattgaacaactcaatgtcaatgatcggcttggtccggctcctgcatcgcg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 agaacaacttattgaacaactcaatgtcaatgatcggcttggtccggctcctgcatcgcg 591
Query: 546 ctcttcgattgatgcaatgccgactattaagatcgcgcaggcacatcttcgctctgattc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctcttcgattgatgcaatgccgactattaagatcgcgcaggcacatcttcgctctgattc 651
Query: 606 gcactgtccggtttgtcaagaaagattcgagctgggctctaaggccagggagatgccgtg 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gcactgtccggtttgtcaagaaagattcgagctgggctctaaggccagggagatgccgtg 711
Query: 666 taaccatatttatcactcggactgtattgttccttggttagttcagcataactcgtgtcc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 taaccatatttatcactcggactgtattgttccttggttagttcagcataactcgtgtcc 771
Query: 726 tgtttgccgaattgagct 743
||||||||||||||||||
Sbjct: 772 tgtttgccgaattgagct 789
>gnl|LJGI|FS338625 similar to UniRef100_A7PFX9 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 827
Score = 1392 bits (702), Expect = 0.0
Identities = 702/702 (100%)
Strand = Plus / Plus
Query: 6 gaaggaaagtgaaagagaaaggatgtcaagtgtagcaacatattggtgttacacatgcag 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gaaggaaagtgaaagagaaaggatgtcaagtgtagcaacatattggtgttacacatgcag 185
Query: 66 gcagccaatcttgttagcagggagagatgtcacttgcccttattgtgatggaagctttgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gcagccaatcttgttagcagggagagatgtcacttgcccttattgtgatggaagctttgt 245
Query: 126 gcaagaacttaatgagaggcaaggcattgcaccccaacatggcttttcatcattagatcc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gcaagaacttaatgagaggcaaggcattgcaccccaacatggcttttcatcattagatcc 305
Query: 186 tcaagcgcctgacatattcgatgctattcactctgttataggtcaaagaggttctgcacc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tcaagcgcctgacatattcgatgctattcactctgttataggtcaaagaggttctgcacc 365
Query: 246 tagaattgggcttagagatgctgttgacagttatatgaggcggagaatggctggtaatag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tagaattgggcttagagatgctgttgacagttatatgaggcggagaatggctggtaatag 425
Query: 306 agacccaaactttgatattagaagggggtctggttctggcctagttcctgaacagacttg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agacccaaactttgatattagaagggggtctggttctggcctagttcctgaacagacttg 485
Query: 366 gggtgtttttagttctggttcttatctgatagttcatgatcaaggtcctgggttctcctt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gggtgtttttagttctggttcttatctgatagttcatgatcaaggtcctgggttctcctt 545
Query: 426 gcctactggtagctcaagaggtgttcctagacgcgtcgaattcggtatgggtcctggact 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gcctactggtagctcaagaggtgttcctagacgcgtcgaattcggtatgggtcctggact 605
Query: 486 agaacaacttattgaacaactcaatgtcaatgatcggcttggtccggctcctgcatcgcg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agaacaacttattgaacaactcaatgtcaatgatcggcttggtccggctcctgcatcgcg 665
Query: 546 ctcttcgattgatgcaatgccgactattaagatcgcgcaggcacatcttcgctctgattc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctcttcgattgatgcaatgccgactattaagatcgcgcaggcacatcttcgctctgattc 725
Query: 606 gcactgtccggtttgtcaagaaagattcgagctgggctctaaggccagggagatgccgtg 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gcactgtccggtttgtcaagaaagattcgagctgggctctaaggccagggagatgccgtg 785
Query: 666 taaccatatttatcactcggactgtattgttccttggttagt 707
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 taaccatatttatcactcggactgtattgttccttggttagt 827
>gnl|LJGI|TC78357
Length = 688
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 836 gaaggagaaatccactatcgtttttgtggccatttcgttcttc 878
||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 126 gaaggagaaatccgctatcatttttgtggcccttccgttcttc 168