Miyakogusa Predicted Gene
- Lj6g3v1008170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1008170.1 Non Chatacterized Hit- tr|I1NE01|I1NE01_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40025
PE,81.16,0,UBA-like,UBA-like; UBA,Ubiquitin-associated/translation
elongation factor EF1B, N-terminal, eukaryot,CUFF.58756.1
(1949 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59605 similar to UniRef100_A7PFY1 Cluster: Chromosome... 2145 0.0
gnl|LJGI|TC68241 similar to UniRef100_A7PFY5 Cluster: Chromosome... 1489 0.0
gnl|LJGI|TC61893 similar to UniRef100_A7PFY5 Cluster: Chromosome... 432 e-120
gnl|LJGI|TC64553 similar to UniRef100_A7PFY1 Cluster: Chromosome... 236 4e-61
gnl|LJGI|AV420964 weakly similar to UniRef100_A7PFY1 Cluster: Ch... 76 9e-13
gnl|LJGI|AW164049 similar to UniRef100_A7PFY5 Cluster: Chromosom... 72 1e-11
>gnl|LJGI|TC59605 similar to UniRef100_A7PFY1 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1295
Score = 2145 bits (1082), Expect = 0.0
Identities = 1082/1082 (100%)
Strand = Plus / Plus
Query: 1 atgtctcctgcttccaaatctaagtctaaagacaaaagggtcggcaaggaggctcagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atgtctcctgcttccaaatctaagtctaaagacaaaagggtcggcaaggaggctcagaag 273
Query: 61 tctccagccaagcccacaggatctgctaatgcagtagctggtgtccctgctagtgcatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tctccagccaagcccacaggatctgctaatgcagtagctggtgtccctgctagtgcatac 333
Query: 121 aatccgttattgggaactttccataccctggaaatatcaccaacatcttcgacttcacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aatccgttattgggaactttccataccctggaaatatcaccaacatcttcgacttcacca 393
Query: 181 gtacattctaatggccgttttcagaatatagatgagacagatgaacatcctattggctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gtacattctaatggccgttttcagaatatagatgagacagatgaacatcctattggctca 453
Query: 241 gcggtagctggtgtggagtatgattctgtttctaataatgatagttggtctggtgagtcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gcggtagctggtgtggagtatgattctgtttctaataatgatagttggtctggtgagtcg 513
Query: 301 gaagaccataaagaaaaagcttctaatcttgctgttcgactggaagcagtaccaggagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaagaccataaagaaaaagcttctaatcttgctgttcgactggaagcagtaccaggagct 573
Query: 361 gataatgacaagcgagagaaaatccgccagaaaaatgagaagaagcatcaacgacagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gataatgacaagcgagagaaaatccgccagaaaaatgagaagaagcatcaacgacagaag 633
Query: 421 gaaaggcgtgcacaggagttgcatgatcgctgcaatggatatcttatgtcaaggaaactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gaaaggcgtgcacaggagttgcatgatcgctgcaatggatatcttatgtcaaggaaactt 693
Query: 481 gaggcacttgctcaacagcttgtggcaatggggttttctcatgagcgtgcaacagttgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gaggcacttgctcaacagcttgtggcaatggggttttctcatgagcgtgcaacagttgca 753
Query: 541 ttgatgctaaatgaagggagggttgaggaatcagtagcatggttatttgaaggtggtgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ttgatgctaaatgaagggagggttgaggaatcagtagcatggttatttgaaggtggtgaa 813
Query: 601 gaagcagataatcagatggatagaaatagaggtgggggtaatttgagaattgacatatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gaagcagataatcagatggatagaaatagaggtgggggtaatttgagaattgacatatca 873
Query: 661 gaagaacttgctcgaattgcagatctagaaacaaggtacagttgctcaaagcaggaggtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 gaagaacttgctcgaattgcagatctagaaacaaggtacagttgctcaaagcaggaggtt 933
Query: 721 gaaagagcggttgttgcttgtgagggtgatcttgataaggctgcggagtccttgagagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gaaagagcggttgttgcttgtgagggtgatcttgataaggctgcggagtccttgagagaa 993
Query: 781 ttgaagatggataggctatctggtcaaccaaagccagaggaaaatggtgattctccatcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 ttgaagatggataggctatctggtcaaccaaagccagaggaaaatggtgattctccatcc 1053
Query: 841 tataagctgtcaggagttgtgagtcagagtccgagggtacaggcaaaaccctttctctct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 tataagctgtcaggagttgtgagtcagagtccgagggtacaggcaaaaccctttctctct 1113
Query: 901 ccaaatcaacccaaaaaagatgataaggattttaactatacaaagtcagcagttatgatt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 ccaaatcaacccaaaaaagatgataaggattttaactatacaaagtcagcagttatgatt 1173
Query: 961 acaggatctacagaatccagcaatagacatttgcagcctcttcttaagagaatccaacct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 acaggatctacagaatccagcaatagacatttgcagcctcttcttaagagaatccaacct 1233
Query: 1021 aagtcagaatgggcaaaaccccaacaagctgctgtaacagctgacaggaggtggccaggt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 aagtcagaatgggcaaaaccccaacaagctgctgtaacagctgacaggaggtggccaggt 1293
Query: 1081 gc 1082
||
Sbjct: 1294 gc 1295
>gnl|LJGI|TC68241 similar to UniRef100_A7PFY5 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 843
Score = 1489 bits (751), Expect = 0.0
Identities = 754/755 (99%)
Strand = Plus / Plus
Query: 1195 caacctgtatcaacaagggagccagtaattgtgatgcagcggcctcaaacggtaaatgca 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caacctgtatcaacaagggagccagtaattgtgatgcagcggcctcaaacggtaaatgca 60
Query: 1255 aagaaggttcctacagcaggcttgagctcatctccttctgatgccgctggcagttggtat 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagaaggttcctacagcaggcttgagctcatctccttctgatgccgctggcagttggtat 120
Query: 1315 ccaactaacaatggagaagttatgaggcccaatggcttcatgcctcctcataatcctagc 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaactaacaatggagaagttatgaggcccaatggcttcatgcctcctcataatcctagc 180
Query: 1375 actagaagcctcaattctaactatggaagctctaatcaaatgtatcatcaacttcagtat 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actagaagcctcaattctaactatggaagctctaatcaaatgtatcatcaacttcagtat 240
Query: 1435 caacctcaacaacagtttgttgctggtagcggtaatgcagtagatcttcaagcaaccaac 1494
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caacctcaacaacggtttgttgctggtagcggtaatgcagtagatcttcaagcaaccaac 300
Query: 1495 caaaacatgtggaatagaacaggtgcatccccaacgcttgctgctgcttcttctctagga 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaaacatgtggaatagaacaggtgcatccccaacgcttgctgctgcttcttctctagga 360
Query: 1555 cttttttcagggcctggatcagcggcgacatcaggagcggcttctccggtagactggagc 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttttttcagggcctggatcagcggcgacatcaggagcggcttctccggtagactggagc 420
Query: 1615 actggtgggtcaatcaagttcgattatacaaacatagactggtccttagataggggttca 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actggtgggtcaatcaagttcgattatacaaacatagactggtccttagataggggttca 480
Query: 1675 tctcctccaaggtccaatgcattatggcgaggactttcaccttttataaagagtaatgct 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctcctccaaggtccaatgcattatggcgaggactttcaccttttataaagagtaatgct 540
Query: 1735 caaataaatggctcaaatgcttctggcatggctgctcaaccgtcaattagatcattaccc 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caaataaatggctcaaatgcttctggcatggctgctcaaccgtcaattagatcattaccc 600
Query: 1795 tctaatgggagcatgggtccgttgcatggattgcaagatggtggagcatcttcttctgca 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tctaatgggagcatgggtccgttgcatggattgcaagatggtggagcatcttcttctgca 660
Query: 1855 gaaatgtctggttctcgagaatggagttctccatttgaagggaaagatatttttacttta 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaaatgtctggttctcgagaatggagttctccatttgaagggaaagatatttttacttta 720
Query: 1915 cctagacagtttgtttcttctccttctctgtaaaa 1949
|||||||||||||||||||||||||||||||||||
Sbjct: 721 cctagacagtttgtttcttctccttctctgtaaaa 755
>gnl|LJGI|TC61893 similar to UniRef100_A7PFY5 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 749
Score = 432 bits (218), Expect = e-120
Identities = 455/534 (85%)
Strand = Plus / Plus
Query: 1 atgtctcctgcttccaaatctaagtctaaagacaaaagggtcggcaaggaggctcagaag 60
||||||||||| ||| ||||||||||||||||| | || | ||||| |||||||||
Sbjct: 207 atgtctcctgcatcccgctctaagtctaaagacaagaaggcttgtaaggaagctcagaag 266
Query: 61 tctccagccaagcccacaggatctgctaatgcagtagctggtgtccctgctagtgcatac 120
|| | || ||||| |||||||| | |||||||||||||||| | || | |||| ||||
Sbjct: 267 gcttctgcaaagcctacaggatcgggtaatgcagtagctggtattccaacgagtggatac 326
Query: 121 aatccgttattgggaactttccataccctggaaatatcaccaacatcttcgacttcacca 180
|| || || || ||||| |||||||| ||||| || |||||| || || | |||||||||
Sbjct: 327 aacccattgttaggaacattccatactctggacatgtcaccatcacctgctacttcacca 386
Query: 181 gtacattctaatggccgttttcagaatatagatgagacagatgaacatcctattggctca 240
||||||||||| ||||||||| ||| ||||||||||| |||||||||||| |||||
Sbjct: 387 atacattctaatagccgttttcggaacatagatgagacggatgaacatcctgggagctca 446
Query: 241 gcggtagctggtgtggagtatgattctgtttctaataatgatagttggtctggtgagtcg 300
| |||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 447 gtggtagctggtcttgagtatgattctgtttctaataatggtagttggtctggtgagtct 506
Query: 301 gaagaccataaagaaaaagcttctaatcttgctgttcgactggaagcagtaccaggagct 360
|||||||||||||| ||| ||||||||| ||||||||| ||||| || |||| ||||||
Sbjct: 507 gaagaccataaagagaaaacttctaatcctgctgttcgggtggaatcattacctggagct 566
Query: 361 gataatgacaagcgagagaaaatccgccagaaaaatgagaagaagcatcaacgacagaag 420
|||||||||||||||||||| ||||| ||||||||||| | ||| |||||||| |||| |
Sbjct: 567 gataatgacaagcgagagaagatccggcagaaaaatgaaaggaaacatcaacggcagagg 626
Query: 421 gaaaggcgtgcacaggagttgcatgatcgctgcaatggatatcttatgtcaaggaaactt 480
|||||||| ||||| ||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 627 gaaaggcgagcacaagagttgcatgagaagtgctgtggttatcttatgtcaaggaaactt 686
Query: 481 gaggcacttgctcaacagcttgtggcaatggggttttctcatgagcgtgcaaca 534
|| ||||||||||||||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 687 gaagcacttgctcaacagcttgtggctatgggattttctcatgaacgggcaaca 740
>gnl|LJGI|TC64553 similar to UniRef100_A7PFY1 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 695
Score = 236 bits (119), Expect = 4e-61
Identities = 441/548 (80%), Gaps = 9/548 (1%)
Strand = Plus / Plus
Query: 1408 aatcaaatgtatcatcaacttcagtatcaacctcaacaacagtttgttgctggtagcggt 1467
||||||||||| || |||||||||||||| |||||||||| ||||||||||| | | ||
Sbjct: 1 aatcaaatgtaccaccaacttcagtatcaccctcaacaaccctttgttgctggcaacagt 60
Query: 1468 aatgcagtagatcttcaagcaaccaaccaa------aacatgtggaatagaacaggtgca 1521
||| |||| |||| |||| ||||| || | ||||| ||||||||||| ||||||
Sbjct: 61 aattcagtggatccccaagtaaccagccgagggaataacatttggaatagaactggtgca 120
Query: 1522 tccccaacgcttgctgctgcttcttctctaggacttttttcagggcctggatcagcggcg 1581
|| |||||||||||||| ||| ||||||| ||||||||||| ||| |||||||| ||
Sbjct: 121 tctccaacgcttgctgccgctgcttctctgggacttttttccgggataggatcagctgcc 180
Query: 1582 acatcaggagcggcttctccggtagactggagcactggtgggtcaatcaagttcgattat 1641
|| ||||| || ||||||||||||||||||||||||||||||| | ||||||| |||
Sbjct: 181 acttcaggggcatcttctccggtagactggagcactggtgggtcggtgcagttcgactat 240
Query: 1642 acaaacatagactggtccttagataggggttcatctcctccaaggtccaatgcattatgg 1701
|| | ||||||||||||||| ||||| |||| | || | |||||||| ||| | ||||||
Sbjct: 241 accagcatagactggtccttggatagaggtttagcttcgccaaggtcaaatcctttatgg 300
Query: 1702 cgaggactttcaccttttataaagagtaatgctcaaataaatggctcaaatgcttctggc 1761
||| |||||||||| | ||| | | |||||| | ||| ||||| |||||||||
Sbjct: 301 ttagggctttcaccttattcaaaaaccagtgctcatacgtatgactcaagtgcttctggt 360
Query: 1762 atggctgctcaaccgtcaattagatcattaccctctaatgggagcatgggtccgttgcat 1821
|||||||||| | |||| |||||| | ||||| ||||||||||| | || ||| |
Sbjct: 361 gctgctgctcaactgccaatgagatcagtgccctcaaatgggagcattgtgcccatgcct 420
Query: 1822 ggattgcaagatggtggagcatcttct---tctgcagaaatgtctggttctcgagaatgg 1878
|||| ||||||||| |||| | ||||| |||| |||||||||| || |||
Sbjct: 421 ggatcgcaagatggcggagtagcttctggcgatgcatctgctgctggttctcgggattgg 480
Query: 1879 agttctccatttgaagggaaagatatttttactttacctagacagtttgtttcttctcct 1938
|||||||| ||||||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct: 481 agttctccgtttgaagggaaagatctttttagtttaccgagacagtttgtttcttctcct 540
Query: 1939 tctctgta 1946
||||||||
Sbjct: 541 tctctgta 548
>gnl|LJGI|AV420964 weakly similar to UniRef100_A7PFY1 Cluster: Chromosome chr6
scaffold_15, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 412
Score = 75.8 bits (38), Expect = 9e-13
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 843 taagctgtcaggagttgtgagtcagagtccgagggtacaggcaaaaccctttctctctcc 902
||||| ||||||||||||||||||||| || ||| ||| ||||||| ||| |||||
Sbjct: 222 taagcagtcaggagttgtgagtcagagcccaaggccacaaacaaaacctattccttctcc 281
Query: 903 aaatcaacccaaaaaagatgataaggattttaactatacaaa 944
|||||||| || |||||| || || |||||||||||||||||
Sbjct: 282 aaatcaactcagaaaagacgaaaaagattttaactatacaaa 323
Score = 73.8 bits (37), Expect = 4e-12
Identities = 109/133 (81%)
Strand = Plus / Plus
Query: 648 aattgacatatcagaagaacttgctcgaattgcagatctagaaacaaggtacagttgctc 707
||||||||||||||||||||||||||| | ||||| | ||||| |||| | |||||
Sbjct: 18 aattgacatatcagaagaacttgctcgggtcgcagacatggaaacccggtatgggtgctc 77
Query: 708 aaagcaggaggttgaaagagcggttgttgcttgtgagggtgatcttgataaggctgcgga 767
|| |||||||||||||||| | |||| | ||| || ||||||||||||||||| ||
Sbjct: 78 gaaacaggaggttgaaagagtgattgtgaactatgaaggcgatcttgataaggctgcaga 137
Query: 768 gtccttgagagaa 780
| |||||||||||
Sbjct: 138 gaccttgagagaa 150
>gnl|LJGI|AW164049 similar to UniRef100_A7PFY5 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 338
Score = 71.9 bits (36), Expect = 1e-11
Identities = 153/192 (79%)
Strand = Plus / Plus
Query: 1 atgtctcctgcttccaaatctaagtctaaagacaaaagggtcggcaaggaggctcagaag 60
||||||||||| ||| ||||||||||||||||| | || | ||||| |||||||||
Sbjct: 146 atgtctcctgcatcccgctctaagtctaaagacaagaaggcttgtaaggaagctcagaag 205
Query: 61 tctccagccaagcccacaggatctgctaatgcagtagctggtgtccctgctagtgcatac 120
| | || ||||| |||||||| | |||||||||||||||| | || |||| ||||
Sbjct: 206 gtttctgcaaagcctacaggatcgggtaatgcagtagctggtattccaaagagtggatac 265
Query: 121 aatccgttattgggaactttccataccctggaaatatcaccaacatcttcgacttcacca 180
|| || || || ||||| |||||||| ||||| || |||||| || || | |||||||||
Sbjct: 266 aacccattgttaggaacattccatactctggacatgtcaccatcacctgctacttcacca 325
Query: 181 gtacattctaat 192
|||||||||||
Sbjct: 326 atacattctaat 337