Miyakogusa Predicted Gene
- Lj6g3v0962610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0962610.1 Non Chatacterized Hit- tr|I1NDW5|I1NDW5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42328 PE,82.39,0,SMG-7
(SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7),NULL;
EST1_DNA_bind,DNA/RNA-bind,CUFF.58739.1
(2931 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS339972 weakly similar to UniRef100_A7PR09 Cluster: Ch... 1289 0.0
gnl|LJGI|BP066303 similar to UniRef100_A7PR10 Cluster: Chromosom... 1033 0.0
gnl|LJGI|TC70549 similar to UniRef100_A7PR10 Cluster: Chromosome... 862 0.0
gnl|LJGI|TC77427 weakly similar to UniRef100_A7PR09 Cluster: Chr... 115 2e-24
>gnl|LJGI|FS339972 weakly similar to UniRef100_A7PR09 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 662
Score = 1289 bits (650), Expect = 0.0
Identities = 659/662 (99%)
Strand = Plus / Plus
Query: 1705 gctgcagggaaggctttagcaagtgttgttctggttgataaaacaatgatatattttgat 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgcagggaaggctttagcaagtgttgttctggttgataaaacaatgatatattttgat 60
Query: 1765 tcaaagacaaagaaatttctcattggtgttcagcctcaatcctcagatgattttgttcaa 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaaagacaaagaaatttctcattggtgttcagcctcaatcctcagatgattttgttcaa 120
Query: 1825 gccgcctattccgtcattcagaccgcagaagaatcacaagaaaaaccagcagcagataaa 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccgcctattccgtcattcagaccgcagaagaatcacaagaaaaaccagcagcagataaa 180
Query: 1885 tcaaaggtggaagttgttcagtcaaaccaacatcagtatatggaaggagatgaggatgat 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaaaggtggaagttgttcagtcaaaccaacatcagtatatggaaggagatgaggatgat 240
Query: 1945 gaagttattgttttcaggcctatggtgtctgagatgcgagctgatgtggctggctcatca 2004
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 241 gaagttattgttttcaggcctatggtgtctgagatgcgagctgacgtggctgtctcatca 300
Query: 2005 tggacaccccatgaggggatggagcctgttctaaaagcttcaggaggagatttaaaattt 2064
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggacaccccatgagggtatggagcctgttctaaaagcttcaggaggagatttaaaattt 360
Query: 2065 catgttaactctacttctaatccactcaacaatctacatcatcaaacaatgccgatttct 2124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catgttaactctacttctaatccactcaacaatctacatcatcaaacaatgccgatttct 420
Query: 2125 gttagtggtatgattcctcaacacctgcaatcagttcagccgcatacatcaaggtggctg 2184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttagtggtatgattcctcaacacctgcaatcagttcagccgcatacatcaaggtggctg 480
Query: 2185 gatgaggaaatttctctcgctaacaatttaaaaggtcttgggttatttgagaatgggcat 2244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatgaggaaatttctctcgctaacaatttaaaaggtcttgggttatttgagaatgggcat 540
Query: 2245 gtgatgaaacctagcttacaagaggctataggcatctcaaatcatgtcggacttcctatt 2304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgatgaaacctagcttacaagaggctataggcatctcaaatcatgtcggacttcctatt 600
Query: 2305 cctatccaacaatctattggtgtggatactaatgtgtttcatggtctctccaaagcttca 2364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cctatccaacaatctattggtgtggatactaatgtgtttcatggtctctccaaagcttca 660
Query: 2365 ga 2366
||
Sbjct: 661 ga 662
>gnl|LJGI|BP066303 similar to UniRef100_A7PR10 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 539
Score = 1033 bits (521), Expect = 0.0
Identities = 535/539 (99%), Gaps = 1/539 (0%)
Strand = Plus / Minus
Query: 533 gtttaatatacttaggtgatcttgctcgttacaaaggaatgtatggtgaaggtgactcat 592
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 539 gtttaatatacttagtngatcttgctcgttacaaaggaatgtatggtgaagntgactcat 480
Query: 593 taaaccgggagttcacagcagcttctagttactactttcaagctgcatctctttggcctt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 taaaccgggagttcacagcagcttctagttactactttcaagctgcatctctttggcctt 420
Query: 653 caagtgggaatccacatcatcagcttgctttattggcttcatattccggggatgagctgg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 caagtgggaatccacatcatcagcttgctttattggcttcatattccggggatgagctgg 360
Query: 713 tggctatttatcggtattttcgtagtctggccgtggatagtccatttacaactgcaagag 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tggctatttatcggtattttcgtagtctggccgtggatagtccatttacaactgcaagag 300
Query: 773 agaacttgatagttgcatttgagaagaatcgtcaaagtttcgctcagcttcctggagatg 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 agaacttgatagttgcatttgagaagaatcgtcaaagtttcgctcagcttcctggagatg 240
Query: 833 ctaaatctcttgcagtcaaagaaccttctgggcgactagctggcaaaggaagaggaaaag 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ctaaatctcttgcagtcaaagaaccttctgggcgactagctggcaaaggaagaggaaaag 180
Query: 893 tggaagcaaaacttgcaacaaggggtactggtgttgataccagtcctagagcagatggag 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tggaagcaaaacttgcaacaaggggtactggtgttgataccagtcctagagcagatggag 120
Query: 953 catccagtatacaagagacttacaaattcttctgtactcggtttgtccggctaaatggaa 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 catccagtatacaagagacttacaaattcttctgtactcggtttgtccggctaaatggaa 60
Query: 1013 tattgtttacacgaacaagcctcgagaccttcac-tgaagttcttgctcttgttagcac 1070
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 59 tattgtttacacgaacaagcctcgagaccttcacntgaagttcttgctcttgttagcac 1
>gnl|LJGI|TC70549 similar to UniRef100_A7PR10 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 607
Score = 862 bits (435), Expect = 0.0
Identities = 444/447 (99%)
Strand = Plus / Plus
Query: 1 atgatgataatacagacggataaaatggctgctccttcgtcacgggagcgtgcacagcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 atgatgataatacagacggataaaatggctgctccttcgtcacgggagcgtgcacagcgc 220
Query: 61 ctctatgataagaacctcgaattggagaataagcgccggaggtcagctcaggcacgggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ctctatgataagaacctcgaattggagaataagcgccggaggtcagctcaggcacgggtc 280
Query: 121 ccatcagatccgaatgcatggcaacagatgcgtgagaactatgaagcaataattcttgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ccatcagatccgaatgcatggcaacagatgcgtgagaactatgaagcaataattcttgag 340
Query: 181 gatcatgctttctgtgatcagcacaatattgaatatgctctctggcagttgcattataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gatcatgctttctgtgatcagcacaatattgaatatgctctctggcagttgcattataag 400
Query: 241 aggattgaggagtttagggcatatttcagtgctgctctttcttctaccagctcaaactca 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 401 aggattgaggagtttagggcatatttcaatgctgctctttcttctaccagctcaaactca 460
Query: 301 tctcagggagggaaaggccctgcacgtcctgatcggataactaaaataaggctgcaattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tctcagggagggaaaggccctgcacgtcctgatcggataactaaaataaggctgcaattc 520
Query: 361 aagacttttctttcagaggcaactggattttaccatgaccttattatgaaaattagagca 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 521 aagacttttctttcaaaggcaactggattttaccatgaccttattatgaaaattatagca 580
Query: 421 aagtatgggcttccccttggttacttt 447
|||||||||||||||||||||||||||
Sbjct: 581 aagtatgggcttccccttggttacttt 607
>gnl|LJGI|TC77427 weakly similar to UniRef100_A7PR09 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 589
Score = 115 bits (58), Expect = 2e-24
Identities = 260/326 (79%), Gaps = 6/326 (1%)
Strand = Plus / Plus
Query: 2590 gatgactacagttggttggatgggtatcaattgcagtcatcaaccaaaggcttaagctcg 2649
||||| ||||||||| ||||||| ||||| | | |||||||||||| ||| || |
Sbjct: 155 gatgattacagttggatggatggatatcattatcctgcatcaaccaaagatttaggcccc 214
Query: 2650 aatggttctcttgcttattctcagtcaaattcttaccaactcagtaacaatggcttgaac 2709
||| || ||||| |||| |||||||||||| || | ||| ||||||||||||| ||||
Sbjct: 215 aatagtactcttacttactctcagtcaaatcctcaacaagtcagtaacaatggattgagt 274
Query: 2710 gggaatatcagctttccatttcctggaaaacaagttccatctgtacctcttcaggtggag 2769
||| || ||||||| || ||||||||||||||| |||||| || | |||| ||
Sbjct: 275 gggtcagtctgctttcccttccctggaaaacaagtttcatctgcac---tgcagggggga 331
Query: 2770 caacagaatgtttggcaagattatcaaccttatgagcttttaaattcacaccatgatcaa 2829
||||| ||| ||||||||||||||| ||| |||||||||||| ||||||| |||||
Sbjct: 332 aaacagtatggttggcaagattatcatacttttgagcttttaaaagcacaccagaatcaa 391
Query: 2830 cagcttcagccacaaca---gctcacaactggaactcaacagttttctcctctgcctgag 2886
||||| ||||||||||| |||||||| | || ||| || | ||| |||||||||
Sbjct: 392 cagctgcagccacaacaaccactcacaacagaaaatcagcattccactcaactgcctgag 451
Query: 2887 caatttcaaggacagtcaatctggac 2912
||||||||||||||||||||||||||
Sbjct: 452 caatttcaaggacagtcaatctggac 477