Miyakogusa Predicted Gene
- Lj6g3v0961550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0961550.1 Non Chatacterized Hit- tr|K4AVN7|K4AVN7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.87,3e-19,Aquaporin-like,Aquaporin-like; MINTRINSICP,Major
intrinsic protein; AQUAPORIN SIP2.1,NULL; AQUAPORIN,CUFF.58734.1
(390 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70540 similar to UniRef100_Q107W9 Cluster: Small basi... 773 0.0
gnl|LJGI|TC65595 similar to UniRef100_Q107W9 Cluster: Small basi... 551 e-156
gnl|LJGI|TC73438 similar to UniRef100_Q5VR89 Cluster: Aquaporin ... 190 4e-48
>gnl|LJGI|TC70540 similar to UniRef100_Q107W9 Cluster: Small basic intrinsic protein
1; n=2; Vitis vinifera|Rep: Small basic intrinsic
protein 1 - Vitis vinifera (Grape), partial (68%)
Length = 1153
Score = 773 bits (390), Expect = 0.0
Identities = 390/390 (100%)
Strand = Plus / Plus
Query: 1 atggaggtgattccaccaaaatataggcacatgattggagggcctactttgaaggttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atggaggtgattccaccaaaatataggcacatgattggagggcctactttgaaggttgac 372
Query: 61 ttgcatacaggagccgttgcagaaggggtgttgacatttgcaatcacttttgctgttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttgcatacaggagccgttgcagaaggggtgttgacatttgcaatcacttttgctgttctc 432
Query: 121 ttcatcgtgctcaggggtcctcgtagtgagttgatgaagacttggttgatggcgatgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttcatcgtgctcaggggtcctcgtagtgagttgatgaagacttggttgatggcgatgtca 492
Query: 181 accgtagctttgatcgttgccggttcggcttatactggaccagccatgaatcctgccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 accgtagctttgatcgttgccggttcggcttatactggaccagccatgaatcctgccttt 552
Query: 241 gcttttggctgggcttacttaaacaactggcacaacacctgggaccagttctatgtttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gcttttggctgggcttacttaaacaactggcacaacacctgggaccagttctatgtttac 612
Query: 301 tggatctgccccttcattggagcaatactggcttcttggctgttccgtgttgtgtttccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tggatctgccccttcattggagcaatactggcttcttggctgttccgtgttgtgtttccc 672
Query: 361 ccaccagtggtaaaacagaagagagcctga 390
||||||||||||||||||||||||||||||
Sbjct: 673 ccaccagtggtaaaacagaagagagcctga 702
>gnl|LJGI|TC65595 similar to UniRef100_Q107W9 Cluster: Small basic intrinsic protein
1; n=2; Vitis vinifera|Rep: Small basic intrinsic
protein 1 - Vitis vinifera (Grape), partial (71%)
Length = 830
Score = 551 bits (278), Expect = e-156
Identities = 278/278 (100%)
Strand = Plus / Plus
Query: 1 atggaggtgattccaccaaaatataggcacatgattggagggcctactttgaaggttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 atggaggtgattccaccaaaatataggcacatgattggagggcctactttgaaggttgac 612
Query: 61 ttgcatacaggagccgttgcagaaggggtgttgacatttgcaatcacttttgctgttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttgcatacaggagccgttgcagaaggggtgttgacatttgcaatcacttttgctgttctc 672
Query: 121 ttcatcgtgctcaggggtcctcgtagtgagttgatgaagacttggttgatggcgatgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ttcatcgtgctcaggggtcctcgtagtgagttgatgaagacttggttgatggcgatgtca 732
Query: 181 accgtagctttgatcgttgccggttcggcttatactggaccagccatgaatcctgccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 accgtagctttgatcgttgccggttcggcttatactggaccagccatgaatcctgccttt 792
Query: 241 gcttttggctgggcttacttaaacaactggcacaacac 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gcttttggctgggcttacttaaacaactggcacaacac 830
>gnl|LJGI|TC73438 similar to UniRef100_Q5VR89 Cluster: Aquaporin SIP1-1; n=1; Oryza
sativa Japonica Group|Rep: Aquaporin SIP1-1 - Oryza
sativa subsp. japonica (Rice), partial (39%)
Length = 517
Score = 190 bits (96), Expect = 4e-48
Identities = 222/264 (84%)
Strand = Plus / Plus
Query: 103 atcacttttgctgttctcttcatcgtgctcaggggtcctcgtagtgagttgatgaagact 162
|||||||||||||| ||||| || | |||| ||| |||||||||| ||||||||||||
Sbjct: 3 atcacttttgctgtcctctttataatcctcaagggacctcgtagtggtttgatgaagact 62
Query: 163 tggttgatggcgatgtcaaccgtagctttgatcgttgccggttcggcttatactggacca 222
|||||| |||| |||||||| || ||||| || | | || || ||||| || || |||
Sbjct: 63 tggttgctggctatgtcaactgtcactttggtcatggttggatctgcttacaccgggcca 122
Query: 223 gccatgaatcctgcctttgcttttggctgggcttacttaaacaactggcacaacacctgg 282
||||||||||||||| ||| ||||| ||||| |||||||||||| |||||||| |||
Sbjct: 123 gccatgaatcctgccaatgcctttggttgggcatacttaaacaacattcacaacacatgg 182
Query: 283 gaccagttctatgtttactggatctgccccttcattggagcaatactggcttcttggctg 342
|||||||||||||| |||||||| |||||||||| |||||||||| ||||| |||||||
Sbjct: 183 gaccagttctatgtatactggatttgccccttcactggagcaatattggctgcttggcta 242
Query: 343 ttccgtgttgtgtttcccccacca 366
||||||| | | ||||||||||||
Sbjct: 243 ttccgtgctatctttcccccacca 266