Miyakogusa Predicted Gene
- Lj6g3v0960490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0960490.1 tr|D7M4I2|D7M4I2_ARALL C2 domain-containing
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAF,60.98,2e-17,C2 domain (Calcium/lipid-binding domain,
CaLB),C2 calcium/lipid-binding domain, CaLB; Protein
kinase,CUFF.58747.1
(1339 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO007223 similar to UniRef100_A7PR04 Cluster: Chromosom... 1187 0.0
gnl|LJGI|TC64915 similar to UniRef100_A7PR04 Cluster: Chromosome... 1017 0.0
gnl|LJGI|TC61593 similar to UniRef100_A7PR04 Cluster: Chromosome... 950 0.0
gnl|LJGI|FS349371 similar to UniRef100_A7Q349 Cluster: Chromosom... 70 4e-11
gnl|LJGI|TC58785 similar to UniRef100_A7Q349 Cluster: Chromosome... 64 2e-09
gnl|LJGI|TC71519 56 6e-07
>gnl|LJGI|GO007223 similar to UniRef100_A7PR04 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 792
Score = 1187 bits (599), Expect = 0.0
Identities = 605/607 (99%)
Strand = Plus / Plus
Query: 1 atggaatcattcaatccaagtcatcaaactaccagcttcaggtacaatccaaactcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atggaatcattcaatccaagtcatcaaactaccagcttcaggtacaatccaaactcaaat 245
Query: 61 aggatgaaccatggagatgatgatgatgctgagttctcagggtttcttgatatctatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aggatgaaccatggagatgatgatgatgctgagttctcagggtttcttgatatctatgtt 305
Query: 121 catcatgctaagaacattcataacatatgcatctatgacaatcaggatgtgtatgctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 catcatgctaagaacattcataacatatgcatctatgacaatcaggatgtgtatgctaaa 365
Query: 181 ttctctctaacttacaaccctgatgagactctttccaccagaatcatcaatgggggtggg 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttctctctaacttacagccctgatgagactctttccaccagaatcatcaatgggggtggg 425
Query: 241 aaaaatccagttttcaatgaaaacttgagggtgaagattaaccagatggatgctgttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aaaaatccagttttcaatgaaaacttgagggtgaagattaaccagatggatgctgttcta 485
Query: 301 aaatgtgagatttggatgtttagcaggtcaagaaatcacttggaagaccagcttttggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaatgtgagatttggatgtttagcaggtcaagaaatcacttggaagaccagcttttggga 545
Query: 361 tttgctttggtcccagtttctaaaatggttggtaaaggaaaagtgactgaagattatagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tttgctttggtcccagtttctaaaatggttggtaaaggaaaagtgactgaagattatagc 605
Query: 421 ctttcctccactgatcttttccattctcctgctggaactgttcagttaactctgtctttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ctttcctccactgatcttttccattctcctgctggaactgttcagttaactctgtctttg 665
Query: 481 gatacatcttttccaatcaattccactgtaaatcccataccacaatcatctactaactca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gatacatcttttccaatcaattccactgtaaatcccataccacaatcatctactaactca 725
Query: 541 tccatatcctcagaagttgtgttgcttgatcgaaaagtcttggaactcgacccaattgag 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 726 tccatatcctcagaagttgtgttgcttgatcgaaaagtcctggaactcgacccaattgag 785
Query: 601 tattcta 607
|||||||
Sbjct: 786 tattcta 792
>gnl|LJGI|TC64915 similar to UniRef100_A7PR04 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 729
Score = 1017 bits (513), Expect = 0.0
Identities = 516/517 (99%)
Strand = Plus / Plus
Query: 823 acaagcataagtgatgatataaactcagctgattcagctgagaaaaagagtaatttaggg 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaagcataagtgatgatataaactcagctgattcagctgagaaaaagagtaatttaggg 60
Query: 883 ggtggctcatcaaattctttcaatgtgtcaatcacagttgagggtagtagtcagaactca 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtggctcatcaaattctttcaatgtgtcaatcacagttgagggtagtagtcagaactca 120
Query: 943 ggtgcttgtcctgataccccaacttccaagaaagaaagtgaagccagagaaaacaaggat 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtgcttgtcctgataccccaacttccaagaaagaaagtgaagccagagaaaacaaggat 180
Query: 1003 tcaaagttctcaagcaaggggaaagagatcaatagtgataggaatgtagtagatgctgcg 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaaagttctcaagcaaggggaaagagatcaatagtgataggaatgtagtagatgctgcg 240
Query: 1063 aaattcggtcaagttttttctgctccaatggggaacatcaacatggaggctgaacaatca 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaattcggtcaagttttttctgctccaatggggaacatcaacatggaggctgaacaatca 300
Query: 1123 gctatgcagcagcaaatagttgacatgtatatgagaagcatgcagcaatttactgaatct 1182
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 gctatgcagcagcaaatagttgacatgtatatgagaagcatgtagcaatttactgaatct 360
Query: 1183 ttggcaaaaatgaagctcccaatggaccttgacaacaaacctgagagtgaagatcgcggt 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttggcaaaaatgaagctcccaatggaccttgacaacaaacctgagagtgaagatcgcggt 420
Query: 1243 gatgtgattcaaaatcataacaacagcaaattagaaattgataagaagaaaaaggatgga 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatgtgattcaaaatcataacaacagcaaattagaaattgataagaagaaaaaggatgga 480
Query: 1303 tcaagggtattttatggtagtcgagcattcttctaat 1339
|||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaagggtattttatggtagtcgagcattcttctaat 517
>gnl|LJGI|TC61593 similar to UniRef100_A7PR04 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 846
Score = 950 bits (479), Expect = 0.0
Identities = 489/491 (99%), Gaps = 1/491 (0%)
Strand = Plus / Plus
Query: 1 atggaatcattcaatccaagtcatcaaactaccagcttcaggtacaatccaaactcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atggaatcattcaatccaagtcatcaaactaccagcttcaggtacaatccaaactcaaat 404
Query: 61 aggatgaaccatggagatgatgatgatgctgagttctcagggtttcttgatatctatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aggatgaaccatggagatgatgatgatgctgagttctcagggtttcttgatatctatgtt 464
Query: 121 catcatgctaagaacattcataacatatgcatctatgacaatcaggatgtgtatgctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 catcatgctaagaacattcataacatatgcatctatgacaatcaggatgtgtatgctaaa 524
Query: 181 ttctctctaacttacaaccctgatgagactctttccaccagaatcatcaatgggggtggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttctctctaacttacaaccctgatgagactctttccaccagaatcatcaatgggggtggg 584
Query: 241 aaaaatccagttttcaatgaaaacttgagggtgaagattaaccagatggatgctgttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aaaaatccagttttcaatgaaaacttgagggtgaagattaaccagatggatgctgttcta 644
Query: 301 aaatgtgagatttggatgtttagcaggtcaagaaatcacttggaagaccagcttttggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaatgtgagatttggatgtttagcaggtcaagaaatcacttggaagaccagcttttggga 704
Query: 361 tttgctttggtcccagtttctaaaatggttggtaaaggaaaagtgactgaagattatagc 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tttgcgttggtcccagtttctaaaatggttggtaaaggaaaagtgactgaagattatagc 764
Query: 421 ctttcctccactgatcttttccattctcctgctggaactgttcagttaactctgtctttg 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 765 ctttcctccactgatcttttccattctcctgctggaactgttcagtt-actctgtctttg 823
Query: 481 gatacatcttt 491
|||||||||||
Sbjct: 824 gatacatcttt 834
>gnl|LJGI|FS349371 similar to UniRef100_A7Q349 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 658
Score = 69.9 bits (35), Expect = 4e-11
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 1127 tgcagcagcaaatagttgacatgtatatgagaagcatgcagcaatttactgaatctttgg 1186
|||||||| | || ||||||||||| |||| ||||||||||||||| || || || || |
Sbjct: 509 tgcagcaggatattgttgacatgtacatgaaaagcatgcagcaattcaccgagtcattag 450
Query: 1187 caaaaatgaagctcccaatggac 1209
||||||||||||| || ||||||
Sbjct: 449 caaaaatgaagcttcctatggac 427
>gnl|LJGI|TC58785 similar to UniRef100_A7Q349 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 1671
Score = 63.9 bits (32), Expect = 2e-09
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 1127 tgcagcagcaaatagttgacatgtatatgagaagcatgcagcaatttactgaatctttgg 1186
|||||||| | ||||| || ||||| |||| ||||||||||| |||||||| || || |
Sbjct: 1176 tgcagcaggatatagtagatatgtacatgaagagcatgcagcagtttactgagtcattag 1235
Query: 1187 caaaaatgaagctcccaatggaccttga 1214
||||||||||||| || |||||| ||||
Sbjct: 1236 caaaaatgaagcttcctatggactttga 1263
>gnl|LJGI|TC71519
Length = 698
Score = 56.0 bits (28), Expect = 6e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 1127 tgcagcagcaaatagttgacatgtatatgagaagcatgcagcaatttactgaatctttgg 1186
|||||||| | ||||| || ||||| |||| |||||| |||| |||||||| || || |
Sbjct: 216 tgcagcaggatatagtagatatgtacatgaagagcatgtagcagtttactgagtcattag 275
Query: 1187 caaaaatgaagctcccaatggaccttga 1214
||||||||||||| || |||||| ||||
Sbjct: 276 caaaaatgaagcttcctatggactttga 303