Miyakogusa Predicted Gene
- Lj6g3v0959470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0959470.1 Non Chatacterized Hit- tr|I1JW83|I1JW83_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.94,0,seg,NULL;
GRAS,Transcription factor GRAS; FAMILY NOT NAMED,NULL,CUFF.58722.1
(1203 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV770800 similar to UniRef100_Q0HA68 Cluster: DELLA pro... 765 0.0
gnl|LJGI|DC596290 weakly similar to UniRef100_A1YIQ8 Cluster: GA... 178 5e-44
gnl|LJGI|TC75269 similar to UniRef100_Q0HA70 Cluster: DELLA prot... 78 1e-13
>gnl|LJGI|AV770800 similar to UniRef100_Q0HA68 Cluster: DELLA protein; n=1; Malus x
domestica|Rep: DELLA protein - Malus domestica (Apple)
(Malus sylvestris), partial (23%)
Length = 500
Score = 765 bits (386), Expect = 0.0
Identities = 401/406 (98%)
Strand = Plus / Minus
Query: 798 tgggttgctggagcggttcacggaggcactacattactactcgaccgtttttgactcgtt 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgggttgctggagcggttcacggaggcactacattactactcgaccgtttttgactcgtt 441
Query: 858 ggaggggtgtccggtcgaaccggataaagcgctggccgagatgtacctacaaagggagat 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggaggggtgtccggtcgaaccggataaagcgctggccgagatgtacctacaaagggagat 381
Query: 918 atgcaatgtggtgtgctgcgagggaacggctcgggtggagcgacacgaaccgctggctaa 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgcaatgtggtgtgctgcgagggaacggctcgggtggagcgacacgaaccgctggctaa 321
Query: 978 gtggagggagcggctcgggaaagccgggttcagaccggttcatttgggttccaatgcatt 1037
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 320 gtggagggagcggctcgggaaagccgggttcagaccggttcatttgggttccgatgcatt 261
Query: 1038 caaacaggcaagcatgttgttaacgctgttctcatcagagggttactgtgtggaagagaa 1097
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cacacaggcaagcatgttgtttacgctgttctcatcagagggttactgtgtggaagagaa 201
Query: 1098 ggaagggtgtttgactctcggctggcatagccgcccccttattgcggcttcagcttggca 1157
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 200 ggaagggtgtttgactctcggctggcatagccgcccccctcttgcggcttcagcttggca 141
Query: 1158 agtcgttgctgtgcaagagactgaagcgctgcgtttggagcactag 1203
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 agtcgttgctgtgcaagagactgaagcgctgcgtttggagcactag 95
>gnl|LJGI|DC596290 weakly similar to UniRef100_A1YIQ8 Cluster: GAI1; n=1; Malus
hupehensis|Rep: GAI1 - Malus hupehensis, partial (4%)
Length = 471
Score = 178 bits (90), Expect = 5e-44
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 atgggtggacacactcctctccgagttcgaccacaccgcctccttaccctacgatctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atgggtggacacactcctctccgagttcgaccacaccgcctccttaccctacgatctctc 389
Query: 61 cgacgatctcgccgccgctcctccgccaca 90
||||||||||||||||||||||||||||||
Sbjct: 390 cgacgatctcgccgccgctcctccgccaca 419
>gnl|LJGI|TC75269 similar to UniRef100_Q0HA70 Cluster: DELLA protein; n=1; Malus x
domestica|Rep: DELLA protein - Malus domestica (Apple)
(Malus sylvestris), partial (68%)
Length = 2133
Score = 77.8 bits (39), Expect = 1e-13
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 309 ctacgaggcttgcccatacctcaaattcgctcacttcaccgcaaaccaggccatcctcga 368
||||||| ||||||| |||||||||||||||||||||||||| || || || ||||||||
Sbjct: 784 ctacgagacttgcccttacctcaaattcgctcacttcaccgccaatcaagcaatcctcga 843
Query: 369 agc 371
|||
Sbjct: 844 agc 846