Miyakogusa Predicted Gene

Lj6g3v0959380.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0959380.1 Non Chatacterized Hit- tr|D8U467|D8U467_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,54.02,4e-18,Ank_5,NULL; no description,Ankyrin repeat-containing
domain; Ankyrin repeat,Ankyrin repeat-containin,CUFF.58737.1
         (477 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63640 similar to UniRef100_A7PR02 Cluster: Chromosome...   946   0.0  

>gnl|LJGI|TC63640 similar to UniRef100_A7PR02 Cluster: Chromosome chr6 scaffold_25,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_25, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 695

 Score =  946 bits (477), Expect = 0.0
 Identities = 477/477 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgcggcagacgcgagcataaaactgcaagctccgcctgaaacgacgccggagaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  atgggtgcggcagacgcgagcataaaactgcaagctccgcctgaaacgacgccggagaac 116

                                                                       
Query: 61  gtggaagccttgcttgaggctgcaaggtatgatgacatggatgatgttgtcagcttagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gtggaagccttgcttgaggctgcaaggtatgatgacatggatgatgttgtcagcttagca 176

                                                                       
Query: 121 tccaatggtgttcctcttgattccaaggatcatcaggggagaacagctcttcatatggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tccaatggtgttcctcttgattccaaggatcatcaggggagaacagctcttcatatggct 236

                                                                       
Query: 181 gcggctaatggacatattgatattgtggagtatttaatcagtagaagagtggatcttaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gcggctaatggacatattgatattgtggagtatttaatcagtagaagagtggatcttaat 296

                                                                       
Query: 241 tcagcgaatgaggaaaagaatacacctcttcattgggcttgtctcaatgggcatattgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcagcgaatgaggaaaagaatacacctcttcattgggcttgtctcaatgggcatattgag 356

                                                                       
Query: 301 gttgtgaagaagttaatcatggctggagctaatgttggtgttttaaacagtcacgatagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gttgtgaagaagttaatcatggctggagctaatgttggtgttttaaacagtcacgatagg 416

                                                                       
Query: 361 actccaatggatgaagctgtgactaggagtaaacttgaagtgatggatgcaattaatgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 actccaatggatgaagctgtgactaggagtaaacttgaagtgatggatgcaattaatgag 476

                                                                    
Query: 421 gcagtggcaatagttgaacttcgtggcgccctggtttcttcccaggaaacttgaagt 477
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gcagtggcaatagttgaacttcgtggcgccctggtttcttcccaggaaacttgaagt 533