Miyakogusa Predicted Gene

Lj6g3v0948300.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0948300.1 Non Chatacterized Hit- tr|F6HA19|F6HA19_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,88.55,0,REGULATOR OF CHROMOSOME CONDENSATION (RCC1),NULL;
REGULATOR OF CHROMOSOME CONDENSATION,NULL; no desc,CUFF.58715.1
         (2064 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81682 similar to UniRef100_A7PQZ5 Cluster: Chromosome...   965   0.0  

>gnl|LJGI|TC81682 similar to UniRef100_A7PQZ5 Cluster: Chromosome chr6 scaffold_25,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_25, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (37%)
          Length = 1246

 Score =  965 bits (487), Expect = 0.0
 Identities = 487/487 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1578 caaacttgttcccacctgtgttgtagccctacttgaacccaatttttgtcaggttgcttg 1637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    caaacttgttcccacctgtgttgtagccctacttgaacccaatttttgtcaggttgcttg 60

                                                                        
Query: 1638 tggtcatagtatgactgttgcactttctagatcaggccatgtctataccatgggcagttg 1697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tggtcatagtatgactgttgcactttctagatcaggccatgtctataccatgggcagttg 120

                                                                        
Query: 1698 tgtctatggtcagttaggaaatcctaaagctgatgggaagctaccaactcgtgttgaagg 1757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tgtctatggtcagttaggaaatcctaaagctgatgggaagctaccaactcgtgttgaagg 180

                                                                        
Query: 1758 aaagctttcaaaaagctttgtggaggaaatagcttgtggtgcatatcatgttgcggtttt 1817
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aaagctttcaaaaagctttgtggaggaaatagcttgtggtgcatatcatgttgcggtttt 240

                                                                        
Query: 1818 aacttcaaggactgaagtttacacttggggtaagggtgcaaatggtcgtttaggccatgg 1877
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  aacttcaaggactgaagtttacacttggggtaagggtgcaaatggtcgtttaggccatgg 300

                                                                        
Query: 1878 agatactgatgataaaaactccccaacattagtagaagcattgaaagacaaacaagtcaa 1937
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  agatactgatgataaaaactccccaacattagtagaagcattgaaagacaaacaagtcaa 360

                                                                        
Query: 1938 aagtattgcttgtggtacaaatttcaccgcagccatatgcctgcataagtgggtatctgg 1997
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  aagtattgcttgtggtacaaatttcaccgcagccatatgcctgcataagtgggtatctgg 420

                                                                        
Query: 1998 tgttgaccaatccatgtgttctggttgccgtctgccatttaatttcaaaaggaaacgcca 2057
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tgttgaccaatccatgtgttctggttgccgtctgccatttaatttcaaaaggaaacgcca 480

                   
Query: 2058 caattgt 2064
            |||||||
Sbjct: 481  caattgt 487