Miyakogusa Predicted Gene

Lj6g3v0938150.2
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0938150.2 Non Chatacterized Hit- tr|F2U2P6|F2U2P6_SALS5
Putative uncharacterized protein OS=Salpingoeca sp. (s,33.85,4.6,
,CUFF.58698.2
         (239 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57311                                                      325   7e-89

>gnl|LJGI|TC57311 
          Length = 1237

 Score =  325 bits (164), Expect = 7e-89
 Identities = 176/180 (97%)
 Strand = Plus / Plus

                                                                       
Query: 60  aacacagagacacactgagagcttagtgacccacacactcacatacaggaaaatcactat 119
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2   aacacagagacagactgagagcttagtgacccacacactcacatacaggaaaatcactct 61

                                                                       
Query: 120 cttcctccctacgcagccctctgattctctcaactcaatcaccaacacacaaaaactcac 179
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  cttcctccctacgcaaccctctgattctctcaactcaatcaccaacacacaaaaactcac 121

                                                                       
Query: 180 cctcaaccaaggatcaccgccacaccatcgccatgtagatccaacaccaccaccgtagtg 239
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 122 cctcaaccaaggatcaccgccacaccatcgccatgtagacccaacaccaccaccgtagtg 181