Miyakogusa Predicted Gene

Lj6g3v0936970.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0936970.1 Non Chatacterized Hit- tr|I1N132|I1N132_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.85,0,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL; HELICASE
CONSERVED C-TERMINAL D,CUFF.58685.1
         (1689 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60837 similar to UniRef100_Q9LUW6 Cluster: DEAD-box A...   266   4e-70
gnl|LJGI|TC77580 similar to UniRef100_A7PW15 Cluster: Chromosome...    54   3e-06
gnl|LJGI|TC57338 similar to UniRef100_Q2HUZ8 Cluster: Helicase, ...    54   3e-06

>gnl|LJGI|TC60837 similar to UniRef100_Q9LUW6 Cluster: DEAD-box ATP-dependent RNA
           helicase 9; n=1; Arabidopsis thaliana|Rep: DEAD-box
           ATP-dependent RNA helicase 9 - Arabidopsis thaliana
           (Mouse-ear cress), partial (30%)
          Length = 794

 Score =  266 bits (134), Expect = 4e-70
 Identities = 385/466 (82%), Gaps = 2/466 (0%)
 Strand = Plus / Plus

                                                                       
Query: 334 aagaaagggatcgccaaactctttcccattcagagagctgtgctggaacctgcgatgaaa 393
           |||||||| ||| |||| ||||| || || ||||| ||||||||||||||||| ||| ||
Sbjct: 306 aagaaaggaatctccaagctcttccctatccagagggctgtgctggaacctgctatgcaa 365

                                                                       
Query: 394 gggcaggatatggtcggtcgagctagaacaggaactgggaagactcttgcttttgggata 453
           || |  |||||| | |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 366 ggtcgtgatatgattggtcgagctagaacaggaactgggaaaactcttgcttttgggata 425

                                                                       
Query: 454 cccatcttggataagattattcaatctaatgctaagcatgggcaaggaagggaccctttg 513
           |||||| |||||||||||||| | |  |||||||||||||| | ||| ||||| ||||||
Sbjct: 426 cccatcatggataagattattaagttcaatgctaagcatggacgagggagggatcctttg 485

                                                                       
Query: 514 gctttggttttggcaccaaccagagaacttgcgcgacaggttgaaaatgagttcaaggat 573
           || |||| |||||| || ||  ||||||||||    ||||| || || || ||| | || 
Sbjct: 486 gcattggctttggctccgactcgagaacttgcaaagcaggtggagaaggaattctatgac 545

                                                                       
Query: 574 gccgcacctaacttgagcacaatctgtctttatgggggtacgcccatc-agcaatcaaat 632
            | || |||||||||   || || ||| |||||||||| || ||||||  |||| || ||
Sbjct: 546 tcagcgcctaacttggatacgatttgtgtttatgggggcactcccatctcgcaa-cagat 604

                                                                       
Query: 633 gagggagcttgattatggtgtagatattgcagttggcacgcctggtcgaattattgatct 692
           |||| | |||||||||||||| ||| |||  || |||||||| |||||||||||||| ||
Sbjct: 605 gaggcaacttgattatggtgttgatgttgtggtgggcacgccgggtcgaattattgacct 664

                                                                       
Query: 693 tcttaaccgaggttcattgaatttgaatgctgttcagtttgttgttctcgatgaagctga 752
           ||| ||| ||||  |  | |||||||| |  ||||||||| | ||||| || ||||||||
Sbjct: 665 tctgaacagaggcgctctaaatttgaaggaggttcagtttatggttcttgacgaagctga 724

                                                         
Query: 753 tcagatgcttcaagtaggatttcaagaagacgtggagaagatcttg 798
           ||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 725 tcagatgcttcaaataggatttcaggaagacgtggagaagatcttg 770


>gnl|LJGI|TC77580 similar to UniRef100_A7PW15 Cluster: Chromosome chr8 scaffold_34,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_34, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (53%)
          Length = 1073

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 1175 ttctagtggcaactgatgttgcttcacgtgggcttgatattcc 1217
            ||||||||||||| ||||||||  ||||||| |||||||||||
Sbjct: 296  ttctagtggcaacagatgttgcagcacgtggtcttgatattcc 338


>gnl|LJGI|TC57338 similar to UniRef100_Q2HUZ8 Cluster: Helicase, C-terminal; Zinc
            finger, CCHC-type; GUCT; n=1; Medicago truncatula|Rep:
            Helicase, C-terminal; Zinc finger, CCHC-type; GUCT -
            Medicago truncatula (Barrel medic), partial (42%)
          Length = 1356

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1201 cgtgggcttgatattccaaatgttgatcttgtaatacattatgatcctccgaataattct 1260
            ||||| ||||||||||| ||||||||| | || ||||||||||| | ||| ||| || ||
Sbjct: 1    cgtggacttgatattcctaatgttgatttggttatacattatgaacttcccaatgatcct 60

                                   
Query: 1261 gagatatttgttcatcgatctgg 1283
            ||||  ||||| ||||| |||||
Sbjct: 61   gagacttttgtacatcgctctgg 83