Miyakogusa Predicted Gene
- Lj6g3v0935870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0935870.1 Non Chatacterized Hit- tr|I1N131|I1N131_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7587
PE=,91.08,0,seg,NULL; Parallel beta-helix repeats,Parallel beta-helix
repeat; Pectin lyase-like,Pectin lyase fol,CUFF.58678.1
(1326 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75627 similar to UniRef100_A7QN93 Cluster: Chromosome... 1078 0.0
gnl|LJGI|TC73973 similar to UniRef100_A7QN93 Cluster: Chromosome... 938 0.0
gnl|LJGI|DC596274 791 0.0
gnl|LJGI|TC78943 similar to UniRef100_A7Q8H9 Cluster: Chromosome... 58 1e-07
gnl|LJGI|TC57648 similar to UniRef100_Q84LI7 Cluster: Polygalact... 58 1e-07
gnl|LJGI|TC82010 similar to UniRef100_A7Q0Z0 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC75627 similar to UniRef100_A7QN93 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 683
Score = 1078 bits (544), Expect = 0.0
Identities = 558/565 (98%)
Strand = Plus / Plus
Query: 762 atatggaattgcatatggtcgccctagctacggtatcaccatccggcgtataacaggatc 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atatggaattgcatatggtcgccctagctacggtatcaccatccggcgtataacaggatc 60
Query: 822 atctccatttgcgggaatcgcaatcggaagcgaaacctccggtggggtggagaatgtact 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctccatttgcgggaatcgcaatcggaagcgaaacctccggtggggtggagaatgtact 120
Query: 882 tgctgagcacatcaacctgttcaacatgggagttggtatccacatcaagacaaacagtgg 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctgagcacatcaacctgttcaacatgggagttggtatccacatcaagacaaacagtgg 180
Query: 942 caggggagggcttatcaagaacataacaatgtctcatgtctacatcgaggaggcaaggca 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggggagggcttatcaagaacataacaatgtctcatgtctacatcgaggaggcaaggca 240
Query: 1002 gggtataaaaattgcaggtgatgttggggaccatccagatgaaaaatttaaccctaatgc 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggtataaaaattgcaggtgatgttggggaccatccagatgaaaaatttaaccctaatgc 300
Query: 1062 tctaccagttgttaaaggtatcacaattacgaatgtttggggtgtgagggttcttcaggc 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctaccagttgttaaaggtatcacaattacgaatgtttggggtgtgagggttcttcaggc 360
Query: 1122 aggtttgataaaaggattgaaaaattccccattcactgatgtctgtctctctgaaatcaa 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggtttgataaaaggattgaaaaattccccattcactgatgtctgtctctctgaaatcaa 420
Query: 1182 ccttcacggcatgtcgggacctagatnnnnnnnttggaagtgttctgatgtgtctggatt 1241
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 421 ccttcacggcatgtcgggacctagatcccccccttggaagtgttctgatgtgtctggatt 480
Query: 1242 tgctcatcaggttagcccatggccatgctctcagctcagcagccaagagactggatcatg 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgctcatcaggttagcccatggccatgctctcagctcagcagccaagagactggatcatg 540
Query: 1302 tgccagtttctcccgagattagaga 1326
|||||||||||||||||||||||||
Sbjct: 541 tgccagtttctcccgagattagaga 565
>gnl|LJGI|TC73973 similar to UniRef100_A7QN93 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 489
Score = 938 bits (473), Expect = 0.0
Identities = 476/477 (99%)
Strand = Plus / Plus
Query: 281 ttgctgctggtgctgttatcaaagctacacaggagttggggaattggcctttaattgcac 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ttgctgctggtgctgttatcaaagctacacaggagttggggaattggcctttaattgcac 72
Query: 341 ctttaccatcttatggaagaggaagggaacgccctggaggaagatatgtgagttttatcc 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ctttaccatcttatggaagaggaagggaacgccctggaggaagatatgtgagttttatcc 132
Query: 401 acggagatggagtcagagatgtagtcatcacaggtgagaatgggacaattgatgggcaag 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 acggagatggagtcagagatgtagtcatcacaggtgagaatgggacaattgatgggcaag 192
Query: 461 gagatgtgtggtggaacatgtggaggcagagaaccctacaatttacaagacctaacctgg 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gagatgtgtggtggaacatgtggaggcagagaaccctacaatttacaagacctaacctgg 252
Query: 521 ttgaatttgtgaattccagaaacattattatatcaaatgtgattttcaaagattctccct 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttgaatttgtgaattccagaaacattattatatcaaatgtgattttcaaagattctccct 312
Query: 581 tctggaatatacaccctgtttactgcagcaatgttgttgttcgatatgtcacaattttgg 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tctggaatatacaccctgtttactgcagcaatgttgttgttcgatatgtcacaattttgg 372
Query: 641 ctcctcgtgactctcctaatactgatggagttgatccagattcaagttccaatgtctgca 700
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 373 ctcctcgtgactctcctaatactgatggagttgacccagattcaagttccaatgtctgca 432
Query: 701 tagaggattcctatatatctacaggagatgatcttgtggctgtgaagagtgggtggg 757
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tagaggattcctatatatctacaggagatgatcttgtggctgtgaagagtgggtggg 489
>gnl|LJGI|DC596274
Length = 434
Score = 791 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Plus
Query: 1 atgcttctctcactcttcttcttctccctctgcttcgccggtggttactccgacccggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atgcttctctcactcttcttcttctccctctgcttcgccggtggttactccgacccggta 95
Query: 61 acatgctccggcatagtcccgcaccgccagcgcaccgacaccatttccatcaccgatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 acatgctccggcatagtcccgcaccgccagcgcaccgacaccatttccatcaccgatttc 155
Query: 121 ggcggtgtcggcgacggccggacgctcaacacgaaggcgttcagggaggcgatttaccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggcggtgtcggcgacggccggacgctcaacacgaaggcgttcagggaggcgatttaccgg 215
Query: 181 attgagcacgtgaggaggcgcggtgggactctgcttttcgtgccgccaggggtttacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 attgagcacgtgaggaggcgcggtgggactctgcttttcgtgccgccaggggtttacttg 275
Query: 241 acggagagcttcaatcttaccagtcacatgactctttatcttgctgctggtgctgttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 acggagagcttcaatcttaccagtcacatgactctttatcttgctgctggtgctgttatc 335
Query: 301 aaagctacacaggagttggggaattggcctttaattgcacctttaccatcttatggaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aaagctacacaggagttggggaattggcctttaattgcacctttaccatcttatggaaga 395
Query: 361 ggaagggaacgccctggaggaagatatgtgagttttatc 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggaagggaacgccctggaggaagatatgtgagttttatc 434
>gnl|LJGI|TC78943 similar to UniRef100_A7Q8H9 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 1110
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 743 tgaagagtgggtgggatgaatatggaattgcatatgg 779
|||||||||| ||||||||||||||| ||||||||||
Sbjct: 897 tgaagagtggttgggatgaatatggagttgcatatgg 933
>gnl|LJGI|TC57648 similar to UniRef100_Q84LI7 Cluster: Polygalacturonase-like
protein; n=1; Fragaria x ananassa|Rep:
Polygalacturonase-like protein - Fragaria ananassa
(Strawberry), partial (86%)
Length = 1557
Score = 58.0 bits (29), Expect = 1e-07
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 735 tgtggctgtgaagagtgggtgggatgaatatgg 767
|||||| ||||||||||||||||||||||||||
Sbjct: 833 tgtggcagtgaagagtgggtgggatgaatatgg 865
>gnl|LJGI|TC82010 similar to UniRef100_A7Q0Z0 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 545
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 748 agtgggtgggatgaatatggaattgcatatggtcg 782
||||||||||| || ||||||||||||||||||||
Sbjct: 92 agtgggtgggacgagtatggaattgcatatggtcg 126