Miyakogusa Predicted Gene
- Lj6g3v0934810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0934810.1 tr|F4IKM1|F4IKM1_ARATH Tropine dehydrogenase
OS=Arabidopsis thaliana GN=At2g29340 PE=4
SV=1,65.79,0.0000005,adh_short_C2,NULL; NAD(P)-binding Rossmann-fold
domains,NULL; no description,NAD(P)-binding domain; ,CUFF.58702.1
(456 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67522 similar to UniRef100_A7PIP7 Cluster: Chromosome... 904 0.0
gnl|LJGI|TC57427 similar to UniRef100_A7PIP7 Cluster: Chromosome... 305 1e-82
gnl|LJGI|TC69086 similar to UniRef100_A7PIP7 Cluster: Chromosome... 125 3e-28
gnl|LJGI|GO011227 similar to UniRef100_A7NYT0 Cluster: Chromosom... 101 4e-21
>gnl|LJGI|TC67522 similar to UniRef100_A7PIP7 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1476
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 1 atgatggcaatcaatctagattctgcattccatttgtgccaacttgcatatcctcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atgatggcaatcaatctagattctgcattccatttgtgccaacttgcatatcctcttctg 569
Query: 61 aaagcatctggaatgggaagcattgtgtttatttcttctattgctggtgtggtaagctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aaagcatctggaatgggaagcattgtgtttatttcttctattgctggtgtggtaagctta 629
Query: 121 ggtactggatcagtctatgcagcaagtaaagctgcaatcaatcagcttaccaaaagtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggtactggatcagtctatgcagcaagtaaagctgcaatcaatcagcttaccaaaagtctg 689
Query: 181 gcttgtgagtgggcaaaagatggcataaggagcaattgtgtagttcctgcaaccaccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gcttgtgagtgggcaaaagatggcataaggagcaattgtgtagttcctgcaaccaccaat 749
Query: 241 acaccgcttgtagaacatctgcttcgcaacaagaagtatgtcgatgaaatgttgtctcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 acaccgcttgtagaacatctgcttcgcaacaagaagtatgtcgatgaaatgttgtctcga 809
Query: 301 actcctattcggcgcatcgcagaagctcaagaaatatcctccttggttgctttcctttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 actcctattcggcgcatcgcagaagctcaagaaatatcctccttggttgctttcctttgt 869
Query: 361 ctgcctgctgcctcttacatcactggacaggttatttgtattgatggaggattaaccgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ctgcctgctgcctcttacatcactggacaggttatttgtattgatggaggattaaccgtg 929
Query: 421 aatggatttcagcccagcatgagaataacatgacat 456
||||||||||||||||||||||||||||||||||||
Sbjct: 930 aatggatttcagcccagcatgagaataacatgacat 965
>gnl|LJGI|TC57427 similar to UniRef100_A7PIP7 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1054
Score = 305 bits (154), Expect = 1e-82
Identities = 361/430 (83%)
Strand = Plus / Plus
Query: 17 tagattctgcattccatttgtgccaacttgcatatcctcttctgaaagcatctggaatgg 76
|||| |||||||||||| ||||||||||||| |||||||||| ||||||||||| |||
Sbjct: 451 tagactctgcattccatctgtgccaacttgcccatcctcttctaaaagcatctggggtgg 510
Query: 77 gaagcattgtgtttatttcttctattgctggtgtggtaagcttaggtactggatcagtct 136
| ||||| ||||| ||||| ||| |||| || ||||| ||||| ||||||||||| ||||
Sbjct: 511 gcagcatcgtgttcatttcatctgttgcaggagtggtgagcttgggtactggatctgtct 570
Query: 137 atgcagcaagtaaagctgcaatcaatcagcttaccaaaagtctggcttgtgagtgggcaa 196
|||||||| ||||||||||||| ||||||||||| || | |||||||||||| |||||||
Sbjct: 571 atgcagcatgtaaagctgcaattaatcagcttacaaagaatctggcttgtgaatgggcaa 630
Query: 197 aagatggcataaggagcaattgtgtagttcctgcaaccaccaatacaccgcttgtagaac 256
|||| |||||||||||||||||| || || | |||| || || ||||||||||
Sbjct: 631 aagacaacataaggagcaattgtgttgtgccatgggcaaccagaaccccacttgtagaac 690
Query: 257 atctgcttcgcaacaagaagtatgtcgatgaaatgttgtctcgaactcctattcggcgca 316
|| || ||| ||| | |||| ||| ||||| || |||||||||| ||| || |||||
Sbjct: 691 atttgtttcaaaaccaaaagtttgtggatgatatcatgtctcgaacccctcttaagcgca 750
Query: 317 tcgcagaagctcaagaaatatcctccttggttgctttcctttgtctgcctgctgcctctt 376
| |||||| | ||||| | || || ||||| |||||||||||| |||||||||| ||||
Sbjct: 751 ttgcagaacccgaagaagtgtcatcgttggtggctttcctttgtttgcctgctgcgtctt 810
Query: 377 acatcactggacaggttatttgtattgatggaggattaaccgtgaatggatttcagccca 436
||||||||||||||||||||||| ||||||||||| |||| ||| |||||||||| ||||
Sbjct: 811 acatcactggacaggttatttgtgttgatggaggactaacagtgtatggatttcaaccca 870
Query: 437 gcatgagaat 446
||||||||||
Sbjct: 871 gcatgagaat 880
>gnl|LJGI|TC69086 similar to UniRef100_A7PIP7 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1216
Score = 125 bits (63), Expect = 3e-28
Identities = 138/163 (84%)
Strand = Plus / Plus
Query: 38 gccaacttgcatatcctcttctgaaagcatctggaatgggaagcattgtgtttatttctt 97
|||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |
Sbjct: 471 gccaacttgcatatcctcttcttaaagcatctggaaatggaagcattgtgttcatttcct 530
Query: 98 ctattgctggtgtggtaagcttaggtactggatcagtctatgcagcaagtaaagctgcaa 157
|| |||| | | ||| | ||||| ||||| | || || || ||||||||||||||||
Sbjct: 531 ctgttgcagctctggcacatgtaggttctggagctgtttacgctgcaagtaaagctgcaa 590
Query: 158 tcaatcagcttaccaaaagtctggcttgtgagtgggcaaaaga 200
||||||| ||||||||| ||| |||||||| |||||||||||
Sbjct: 591 tcaatcaacttaccaaatatcttgcttgtgaatgggcaaaaga 633
Score = 101 bits (51), Expect = 4e-21
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 340 tccttggttgctttcctttgtctgcctgctgcctcttacatcactggacaggttatttgt 399
|||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||| |
Sbjct: 773 tccttggtcactttcctttgcctgccagctgcttcctacatcactggacaggttatttct 832
Query: 400 attgatggaggattaaccgtgaatggatttcagcccagcatgagaat 446
||||||| ||||| || | ||||||||||| ||||||||||||||
Sbjct: 833 gttgatgggggatttactgccaatggatttcaacccagcatgagaat 879
>gnl|LJGI|GO011227 similar to UniRef100_A7NYT0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 678
Score = 101 bits (51), Expect = 4e-21
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 340 tccttggttgctttcctttgtctgcctgctgcctcttacatcactggacaggttatttgt 399
|||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||| |
Sbjct: 375 tccttggtcactttcctttgcctgccagctgcttcctacatcactggacaggttatttct 434
Query: 400 attgatggaggattaaccgtgaatggatttcagcccagcatgagaat 446
||||||| ||||| || | ||||||||||| ||||||||||||||
Sbjct: 435 gttgatgggggatttactgccaatggatttcaacccagcatgagaat 481