Miyakogusa Predicted Gene

Lj6g3v0933500.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0933500.1 Non Chatacterized Hit- tr|H3B7M6|H3B7M6_LATCH
Uncharacterized protein OS=Latimeria chalumnae GN=SMG9,29,1e-18,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; seg,NULL; SUBFAMILY ,CUFF.58670.1
         (1194 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76436 similar to UniRef100_A7PBC6 Cluster: Chromosome...   938   0.0  
gnl|LJGI|TC70941 weakly similar to UniRef100_A7PBC6 Cluster: Chr...   733   0.0  

>gnl|LJGI|TC76436 similar to UniRef100_A7PBC6 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (35%)
          Length = 508

 Score =  938 bits (473), Expect = 0.0
 Identities = 485/489 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgggctctgagccctctccttctccaaaaatccttctagcaaagcccggtctcgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20  atggcgggctctgagccctctccttctccaaaaatccttctagcaaagcccggtctcgtt 79

                                                                       
Query: 61  accggaggccccgtcgccggcaagttcggccgcggcgccgccggcgaagatgattccgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  accggaggccccgtcgccggcaagttcggccgcggcgccgccggcgaagatgattccgcc 139

                                                                       
Query: 121 cagcaccgttctcgtctcccttctgtcgcatccctcaaccttctctccgattcctgggac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cagcaccgttctcgtctcccttctgtcgcatccctcaaccttctctccgattcctgggac 199

                                                                       
Query: 181 ttccacatcgatcgctttctcccctttttgactgaaaacacggacttcactgtgattgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttccacatcgatcgctttctcccctttttgactgaaaacacggacttcactgtgattgga 259

                                                                       
Query: 241 gtgattgggccaccaggagttggcaagtccactataatgaatgaactttatggctttgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtgattgggccaccaggagttggcaagtccactataatgaatgaactttatggctttgat 319

                                                                       
Query: 301 tcaagttcccctgggatgctaccaccttttgctacacagtctgaagagaatagagcaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcaagttcccctgggatgctaccaccttttgctacacagtctgaagagaatagagcaatg 379

                                                                       
Query: 361 gcaaggcattgttctacgggcattgaaccgaggatatctgctgaacgtattattcttctt 420
           ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 380 gcaaggcattgttctacgggcattgaaccaagaatatctgctgaacgtattattcttctt 439

                                                                       
Query: 421 gatactcaacctgtatttagtgcttccgttttagctgagatgatgagaccagatggctct 480
           |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 440 gatactcagcctgtatttagtgcttctgttttagctgagatgatgagaccagatggctct 499

                    
Query: 481 tcaacagtt 489
           |||||||||
Sbjct: 500 tcaacagtt 508


>gnl|LJGI|TC70941 weakly similar to UniRef100_A7PBC6 Cluster: Chromosome chr16
            scaffold_10, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (21%)
          Length = 534

 Score =  733 bits (370), Expect = 0.0
 Identities = 376/378 (99%)
 Strand = Plus / Plus

                                                                        
Query: 817  cagttgaggaagacactcatacagtacttcaaaccgtcttcttttgtgagggaacatgcc 876
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cagttgaggaagacactcatacagtacttcaaaccgtcttcttttgtgagggaacatgcc 60

                                                                        
Query: 877  gaacacaagcccgaggagcatatttcatcttctatggttcatgatagtcctatggattct 936
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gaacacaagcccgaggagcatatttcatcttctatggttcatgatagtcctatggattct 120

                                                                        
Query: 937  aatgtgccaagtttgtttgcaatcccatttaagaaaaaggatgaaaatccgagagctcag 996
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aatgtgccaagtttgtttgcaatcccatttaagaaaaaggatgaaaatccgagagctcag 180

                                                                        
Query: 997  catggaagttacatttcagcactatggaaattacgggatcagatattatccatgaagtca 1056
            ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181  catggaagttacatttcggcactatggaacttacgggatcagatattatccatgaagtca 240

                                                                        
Query: 1057 ccatctttcactagacctgtgtctgagcgtgaatggttaaaaaattcagccaagatatgg 1116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ccatctttcactagacctgtgtctgagcgtgaatggttaaaaaattcagccaagatatgg 300

                                                                        
Query: 1117 gaacaggtaaaaaactccccaacgatgttggagtactgcagaacacttcaacaatcgggt 1176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gaacaggtaaaaaactccccaacgatgttggagtactgcagaacacttcaacaatcgggt 360

                              
Query: 1177 atgtttaggaggtgaaat 1194
            ||||||||||||||||||
Sbjct: 361  atgtttaggaggtgaaat 378